Skip to content

Commit cd40d24

Browse files
committed
Simplified downloads page & added links to projects page in docs
1 parent 332f6e6 commit cd40d24

File tree

1 file changed

+49
-25
lines changed

1 file changed

+49
-25
lines changed

downloads.html

Lines changed: 49 additions & 25 deletions
Original file line numberDiff line numberDiff line change
@@ -90,7 +90,7 @@ <h1>Docker simulation stack</h1>
9090
<div class="pagination-centered">
9191

9292
<p class="lead">
93-
We have created a <strong>Docker container</strong> which contains all of the major components of the simulation stack we have built so far. It can be used to run a <strong>preliminary model</strong> of the worm in 3D on your computer.
93+
We have created a <strong>Docker container</strong> which contains all of the major components of the <a href="http://docs.openworm.org/en/latest/projects/" target="_blank">simulation stack</a> we have built so far. It can be used to run a <strong>preliminary model</strong> of the worm in 3D on your computer.
9494
<br/>
9595
</p>
9696
<br/>
@@ -110,52 +110,76 @@ <h1>Docker simulation stack</h1>
110110
<div class="page-header">
111111
<h1>For coders</h1>
112112
</div>
113+
113114
<div class="pagination-centered">
114115
<i class="fa fa-github-alt fa-xl"></i>
115116
<br/><br/><br/>
116117
</div>
117118
<div class="row-fluid pagination-centered">
118119

120+
121+
<p class="lead span6">
122+
<strong>Geppetto</strong> is a web-based platform for visualizing and simulating data and models. It started in the OpenWorm project and is being used for a number of other projects across neuroscience.
123+
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/org.geppetto/releases" target="_blank">Geppetto releases</a>
124+
</p>
125+
126+
<p class="lead span6">
127+
The 3D worm body model in OpenWorm is being developed in <strong>Sibernetic</strong>. you can download this application and run the particle hydrodynamics simulations on your own machine.
128+
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/sibernetic" target="_blank">Get Sibernetic</a>
129+
</p>
130+
131+
132+
</div>
133+
<br/>
134+
<div class="row-fluid pagination-centered">
135+
119136
<p class="lead span6">
120-
We packaged <strong>Eclipse distributions</strong> for the different operating systems, ready with all the plugins necessary to start working on Geppetto, our simulation engine.
121-
<br/><br/><a class="btn btn-primary btn-large" href="http://blog.openworm.org/post/31859097261/openworm-eclipse-distributions-released" target="_blank">Eclipse Distributions</a>
137+
We have developed a Python library, <strong>owmeta</strong>, which gives easy programmatic access to a wide range of anatomical and physiological data about <i>C. elegans</i>.
138+
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/owmeta" target="_blank">Download owmeta</a>
122139
</p>
140+
123141
<p class="lead span6">
124-
Geppetto's <strong>alpha release</strong> is now available, see release notes <a href="https://github.com/openworm/org.geppetto/releases" target="_blank">here</a>. Here's <a href="https://github.com/openworm/OpenWorm/wiki/Geppetto---Install-instructions" target="_blank">instructions</a>.
125-
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/org.geppetto/releases" target="_blank">Geppetto alpha release</a>
142+
The <strong>c302</strong> framework allows network models of the <i>C. elegans</i> nervous system to be generated at various levels of detail to simulate the activity of the brain of the worm.
143+
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/c302" target="_blank">Install c302</a>
144+
</p>
145+
146+
147+
</div>
148+
149+
<div class="pagination-centered">
150+
151+
<br/>
152+
<p class="lead">
153+
Find out how these and other software packages fit together on our <a href="http://docs.openworm.org/en/latest/projects/" target="_blank">OpenWorm projects page</a>.
154+
<br/>
126155
</p>
156+
127157
</div>
158+
159+
128160
</section>
129161

130162
<!-- Scientist ================================================== -->
131163
<section id="scientist">
132164
<div class="page-header">
133165
<h1>For scientists</h1>
134166
</div>
167+
168+
169+
135170
<div class="pagination-centered">
136-
<i class="fa fa-beaker fa-xl"></i>
137-
</div>
138171

139-
<div class="row-fluid pagination-centered">
140-
<p class="lead span6" href="">
141-
We have captured the full 3D morphology of the C. elegans <b>connectome</b> in NeuroML format, and we are currently working to integrate electro-physiology.
142-
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/CElegansNeuroML/archive/SNAPSHOT_030213.zip" target="_blank">NeuroML Connectome</a>
143-
</p>
144-
<p class="lead span6">
145-
We have imported the NeuroML connectome model for C. elegans into a <a href="http://www.neuroconstruct.org">neuroConstruct</a> project. Here's a <a href="https://github.com/openworm/OpenWorm/wiki/Running-the-C.-elegans-model-in-neuroConstruct">guide to getting started</a> with it.
146-
<br/><br/><a class="btn btn-primary btn-large" href="https://www.dropbox.com/s/xdu1bh5sq2x1nx6/CElegansNeuroConstructBundle-snapshot-20140107.zip" target="_blank">neuroConstruct project</a>
147-
</p>
148-
</div>
149-
<div class="row-fluid pagination-centered">
150-
<p class="lead span6">
151-
We have optimized electro-physiology for a specific C. elegans muscle cell (we plan on doing this on the rest of the cells too) in NeuroML format.
152-
<br/><br/><a class="btn btn-primary btn-large" href="https://github.com/openworm/muscle_model/archive/SNAPSHOT_030213.zip" target="_blank">NeuroML Muscle cell</a>
153-
</p>
154-
<p class="lead span6">
155-
We are maintaining an online folder with data spreadsheets and information, including lists of all C. elegans neurons. Anything to add? Give us a <a href="contacts.html">shout</a>!
156-
<br/><br/><a class="btn btn-primary btn-large" href="https://docs.google.com/folder/d/0B_t3mQaA-HaMejlrMmpnR2VjN0U/edit?usp=sharing" target="_blank">Data folder</a>
172+
<p class="lead">
173+
We have created a number of <strong>scientific resources</strong> aimed at the <i>C. elegans</i> community to assist research into this fascinating organism.
174+
<br/>
157175
</p>
176+
<br/>
177+
<a class="btn btn-primary btn-large" href="science.html" target="_blank">Scientific resources</a>
178+
158179
</div>
180+
181+
182+
159183
</section>
160184
</div>
161185
</div>

0 commit comments

Comments
 (0)