Ensure empty folders are present

Author: minitriga

tests/unit/ctl/test_repository_app.py

@@ -318,4 +318,6 @@ def test_repo_init(self) -> None:
 
             assert coppied_answers == answers
             assert (dst / "generators").is_dir()
+            assert (dst / "queries").is_dir()
+            assert (dst / "scripts").is_dir()
             assert (dst / "pyproject.toml").is_file()