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jasperanjasperan
authored
Merge pull request #16 from paulparkinson/main
Init work for oracle-ai-for-sustainable-dev workshop
2 parents 0473258 + 2f0a63d commit c8a75a9

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‎README 2.md

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‎build.sh

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#!/bin/bash
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source env.properties
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#The following is temporary until release is available in maven and only required to be called once...
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mvn org.apache.maven.plugins:maven-install-plugin:2.5.2:install-file -Dfile=lib/oci-java-sdk-generativeai-3.25.1-preview1-20230906.204234-1.jar
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mvn clean package

‎build_and_push.sh

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#!/bin/bash
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source env.properties
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IMAGE_NAME=oracleai
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IMAGE_VERSION=0.1
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‎build_and_run.sh

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#!/bin/bash
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export OPENAI_KEY="sk-youropenaikeyhere-asdf"
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export OCICONFIG_FILE=~/.oci/config
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export OCICONFIG_PROFILE=DEFAULT
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mvn clean package ; java -jar target/oracleai-0.0.1-SNAPSHOT.jar
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#source ~/Downloads/env.properties
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source env.properties
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mvn clean package ; java -Djava.security.debug="access,failure" -jar target/oracleai-0.0.1-SNAPSHOT.jar

‎datasets/vitals_subset_training.csv

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New medication prescribed after Readmission,Systolic Blood Pressure,Respiratory Rate ,Heart Rate ,Left Ventricular Ejection Fraction ,Sodium ,BUN ,Creatinine ,Glucose ,Hematocrit,Cholestoral (mg/dL),hypertension ,BMI,smoking_status,Disease Identification,RISK SCORE
2+
0,155,19,82,36,132,41,2.9,113,35,170,2,,1,Pneumonia,low
3+
0,159,17,82,40,140,43,2.7,95,35,164,3,,3,Influenza/COVID,low
4+
1,174,24,109,19,125,57,3.5,144,26,175,3,,1,Clostridioides Difficile,high
5+
0,172,21,95,17,126,51,3.7,145,26,164,2,,3,Candida Aurea,high
6+
0,163,19,86,23,129,46,3.6,116,27,167,1,,3,Hepatitis,medium
7+
1,182,20,100,20,127,50,3.9,145,22,178,3,,1,MRSA,high
8+
0,143,18,72,53,135,7,1.2,103,41,177,1,,3,VISA,none
9+
0,163,19,76,33,135,43,2.9,103,32,172,3,,1,VRE,low
10+
0,175,24,105,18,127,56,3.8,138,27,169,2,,1,Pneumonia,high
11+
0,183,21,105,20,128,54,4,131,27,163,3,,1,Influenza/COVID,high
12+
0,180,23,91,19,127,50,3.6,133,28,172,1,,3,Clostridioides Difficile,high
13+
0,160,19,86,30,128,46,3.9,112,29,170,3,,1,Candida Aurea,medium
14+
1,174,20,109,17,126,55,3.8,136,21,167,1,,2,Hepatitis,high
15+
0,161,17,78,33,138,44,2.9,102,32,175,3,,3,MRSA,low
16+
0,138,17,72,48,140,14,1,99,47,179,1,,3,VISA,none
17+
0,136,16,70,55,139,14,0.9,95,41,161,1,,2,VRE,none
18+
0,154,18,80,37,140,45,2.8,105,34,175,2,,1,Pneumonia,low
19+
0,155,19,76,38,135,44,2.6,99,34,160,1,,2,Influenza/COVID,low
20+
0,162,17,76,37,139,44,3,117,34,165,3,,3,Clostridioides Difficile,low
21+
0,151,19,78,35,137,44,2.5,96,30,175,1,,2,Candida Aurea,low
22+
0,143,15,74,53,136,6,1,101,49,175,1,,2,Hepatitis,none
23+
0,154,20,88,30,130,48,3.6,116,26,166,2,,3,MRSA,medium
24+
0,158,17,81,31,132,40,2.7,116,34,160,3,,1,VISA,low
25+
0,185,22,107,17,126,55,3.7,145,23,173,3,,1,VRE,high
26+
0,179,21,109,15,128,59,3.8,135,29,162,1,,2,Pneumonia,high
27+
0,163,22,90,23,129,49,3.8,128,27,178,1,,1,Influenza/COVID,medium
28+
0,154,17,81,34,130,40,2.6,107,34,171,1,,3,Clostridioides Difficile,low
29+
0,146,18,80,40,139,41,2.9,98,32,160,3,,2,Candida Aurea,low
30+
0,149,17,76,30,138,44,3,94,34,171,3,,1,Hepatitis,low
31+
0,155,22,89,25,129,50,3.6,132,25,165,2,,2,MRSA,medium
32+
0,148,17,85,39,139,42,2.8,90,32,169,2,,1,VISA,low
33+
0,144,18,73,52,137,11,1.1,107,43,166,1,,2,VRE,none
34+
1,159,19,88,23,128,50,3.7,126,25,176,2,,3,Pneumonia,medium
35+
1,161,17,79,32,140,44,2.9,92,34,173,3,,1,Influenza/COVID,low
36+
0,143,18,73,48,137,14,1.1,91,41,173,3,,1,Clostridioides Difficile,none
37+
0,169,20,86,25,130,49,4,112,26,171,1,,2,Candida Aurea,medium
38+
0,157,22,87,25,128,48,3.5,128,28,180,2,,1,Hepatitis,medium
39+
1,173,22,103,19,127,58,3.8,130,23,161,1,,3,MRSA,high
40+
0,137,15,71,45,138,8,0.7,110,45,164,1,,2,VISA,none
41+
0,151,19,75,39,131,41,2.9,120,34,173,2,,2,VRE,low
42+
0,179,22,104,15,125,59,4,134,21,178,3,,3,Pneumonia,high
43+
0,185,24,91,16,128,51,4,136,26,161,2,,1,Influenza/COVID,high
44+
0,178,22,110,19,125,50,3.6,140,28,179,2,,2,Clostridioides Difficile,high
45+
0,183,20,96,19,125,55,3.8,135,26,168,1,,2,Candida Aurea,high
46+
1,145,17,71,46,138,13,0.7,106,44,177,2,,1,Hepatitis,none
47+
0,136,15,75,53,140,12,1.1,105,49,170,2,,1,MRSA,none
48+
0,142,18,70,50,138,14,1.1,104,44,160,1,,3,VISA,none
49+
0,165,19,88,27,128,46,4,135,25,179,1,,3,VRE,medium
50+
0,160,19,90,23,129,46,3.7,114,30,175,1,,2,Pneumonia,medium
51+
1,143,17,70,47,137,6,0.7,82,50,177,1,,3,Influenza/COVID,none
52+
0,166,20,90,30,128,50,3.5,116,30,163,3,,2,Clostridioides Difficile,medium
53+
0,161,18,78,38,139,41,2.6,102,31,180,3,,3,Candida Aurea,low
54+
0,160,17,79,32,130,42,2.7,99,34,178,3,,1,Hepatitis,low
55+
1,169,20,85,21,130,50,3.6,113,29,179,1,,3,MRSA,medium
56+
0,152,18,88,27,128,50,3.7,139,28,164,3,,1,VISA,medium
57+
0,161,17,76,31,130,43,2.9,97,33,180,3,,2,VRE,low
58+
0,157,19,90,30,129,48,3.5,139,29,162,2,,3,Pneumonia,medium
59+
0,156,17,76,31,131,42,2.9,91,31,160,2,,2,Influenza/COVID,low
60+
0,161,18,87,20,129,47,3.6,112,25,178,1,,3,Clostridioides Difficile,medium
61+
1,138,15,75,54,136,9,0.9,106,48,161,1,,3,Candida Aurea,none
62+
0,144,16,71,46,140,6,0.9,89,44,168,3,,3,Hepatitis,none
63+
0,135,17,71,46,137,13,1,101,43,162,3,,3,MRSA,none
64+
0,181,21,98,15,128,53,3.6,142,25,163,1,,2,VISA,high
65+
0,175,22,101,16,127,59,3.8,141,28,162,1,,2,VRE,high
66+
0,184,20,110,20,125,60,3.8,145,27,179,2,,2,Pneumonia,high
67+
0,135,15,70,53,136,13,0.9,103,48,173,2,,2,Influenza/COVID,none
68+
0,155,21,90,26,130,48,3.6,113,25,164,1,,2,Clostridioides Difficile,medium
69+
1,159,18,83,38,137,40,2.5,104,34,172,1,,3,Candida Aurea,low
70+
0,164,19,84,35,134,42,2.9,116,35,167,1,,1,Hepatitis,low
71+
0,162,19,82,35,136,44,3,93,30,169,1,,1,MRSA,low
72+
1,177,20,106,18,126,50,4,143,28,176,1,,2,VISA,high
73+
0,155,17,77,30,134,45,2.7,110,34,176,3,,2,VRE,low
74+
0,159,19,79,33,134,40,2.9,108,35,169,3,,2,Pneumonia,low
75+
0,140,17,70,47,138,8,0.9,91,44,172,2,,1,Influenza/COVID,none
76+
0,159,22,88,30,128,48,3.5,129,25,160,3,,1,Clostridioides Difficile,medium
77+
0,175,20,90,20,127,57,3.7,135,23,173,3,,3,Candida Aurea,high
78+
0,161,18,85,30,130,49,3.8,125,29,160,2,,2,Hepatitis,medium
79+
0,153,19,86,23,129,47,3.8,110,26,169,3,,1,MRSA,medium
80+
0,185,24,94,20,127,57,3.8,134,28,179,3,,2,VISA,high
81+
0,156,18,81,33,139,44,2.6,91,31,165,2,,1,VRE,low
82+
0,149,18,84,36,139,43,2.8,93,34,177,1,,1,Pneumonia,low
83+
0,180,23,101,15,127,57,3.6,137,24,179,3,,2,Influenza/COVID,high
84+
1,153,19,90,24,130,48,3.8,113,28,177,3,,1,Clostridioides Difficile,medium
85+
0,159,20,86,23,128,45,3.9,127,26,174,1,,3,Candida Aurea,medium
86+
0,171,23,96,16,127,55,3.9,142,22,172,3,,1,Hepatitis,high
87+
0,144,18,73,53,138,9,0.8,96,43,168,2,,3,MRSA,none
88+
0,138,17,73,52,135,7,0.9,88,42,173,2,,1,VISA,none
89+
0,165,17,84,38,134,44,3,106,35,175,2,,3,VRE,low
90+
0,171,21,95,16,128,57,3.5,137,28,162,1,,3,Pneumonia,high
91+
0,184,23,110,18,127,56,3.6,137,24,180,3,,1,Influenza/COVID,high
92+
1,159,21,89,20,130,48,3.9,125,25,161,3,,1,Clostridioides Difficile,medium
93+
0,140,15,74,51,136,8,1,97,47,175,1,,1,Candida Aurea,none
94+
0,180,22,100,16,127,52,3.7,135,30,180,3,,2,Hepatitis,high
95+
0,183,23,101,17,126,60,3.5,130,22,168,3,,1,MRSA,high
96+
0,160,21,87,29,128,50,3.8,131,25,168,3,,2,VISA,medium
97+
0,182,21,110,20,127,59,3.6,139,29,166,2,,2,VRE,high
98+
0,139,18,74,49,135,10,1.3,110,42,162,3,,2,Pneumonia,none
99+
0,169,20,89,24,129,46,3.8,121,29,164,3,,2,Influenza/COVID,medium
100+
0,156,21,86,23,130,45,3.8,112,29,175,2,,1,Clostridioides Difficile,medium
101+
0,162,18,82,32,131,43,2.8,113,35,171,1,,1,Candida Aurea,low
102+
0,147,17,81,34,134,44,2.8,95,30,179,3,,1,Hepatitis,low
103+
0,145,17,81,37,131,40,3,106,30,177,3,,3,MRSA,low
104+
0,136,17,73,54,136,11,1.1,107,49,167,1,,3,VISA,none
105+
0,151,20,88,26,129,45,3.7,135,29,163,1,,3,VRE,medium
106+
0,178,22,100,15,125,60,3.8,142,20,176,3,,3,Pneumonia,high
107+
0,185,22,90,16,125,53,3.8,136,23,178,3,,3,Influenza/COVID,high
108+
0,145,19,83,36,137,41,2.6,111,34,180,2,,3,Clostridioides Difficile,low
109+
0,157,19,89,28,130,48,4,115,27,161,2,,1,Candida Aurea,medium
110+
0,145,17,85,30,131,44,2.8,100,31,174,1,,2,Hepatitis,low
111+
0,151,22,85,24,130,45,3.7,134,28,165,3,,2,MRSA,medium
112+
0,159,19,80,39,138,44,3,92,31,161,2,,3,VISA,low
113+
0,139,16,71,47,140,15,0.9,83,48,161,1,,1,VRE,none
114+
0,176,24,101,17,125,60,3.7,144,25,179,3,,1,Pneumonia,high
115+
0,161,19,79,30,131,43,2.8,105,31,162,3,,1,Influenza/COVID,low
116+
0,135,15,72,53,139,15,0.8,105,47,175,3,,2,Clostridioides Difficile,none
117+
0,165,17,78,37,133,43,2.7,90,30,167,2,,2,Candida Aurea,low
118+
0,150,21,89,26,128,45,3.6,134,25,164,3,,1,Hepatitis,medium
119+
0,145,15,70,46,137,13,0.7,87,46,177,2,,2,MRSA,none
120+
0,156,19,89,27,130,49,3.8,140,29,162,2,,2,VISA,medium
121+
0,158,19,80,36,137,41,3,104,35,164,3,,3,VRE,low

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