GR-46040: fix scipy build from source

 - unpin gast 0.5.3
 - update scipy 1.10.1 patch

Author: cosminbasca

graalpython/lib-graalpython/patches/gast/metadata.toml

@@ -1,3 +1,8 @@
 [[rules]]
 version = '== 0.12.0'
-patch = 'pythran-0.12.0.patch'
+patch = 'pythran-0.12.0.patch'
+
+[[rules]]
+install-priority = 10
+version = '== 0.13.*'
+patch = 'pythran-0.13.patch'

graalpython/lib-graalpython/patches/pythran/metadata.toml

@@ -0,0 +1,26 @@
+diff --git a/pythran/pythonic/python/core.hpp b/pythran/pythonic/python/core.hpp
+index ff44c01..23b4413 100644
+--- a/pythran/pythonic/python/core.hpp
++++ b/pythran/pythonic/python/core.hpp
+@@ -53,7 +53,7 @@ namespace python
+ {
+ 
+ #ifndef PyString_AS_STRING
+-#define PyString_AS_STRING (char *)_PyUnicode_COMPACT_DATA
++#define PyString_AS_STRING PyBytes_AS_STRING
+ #endif
+ 
+   inline void PyObject_TypePrettyPrinter(std::ostream &oss, PyObject *obj)
+diff --git a/pythran/pythonic/types/str.hpp b/pythran/pythonic/types/str.hpp
+index 1f7a981..00440a9 100644
+--- a/pythran/pythonic/types/str.hpp
++++ b/pythran/pythonic/types/str.hpp
+@@ -744,7 +744,7 @@ namespace std
+ #define PyString_Check(x) PyUnicode_Check(x) && PyUnicode_IS_COMPACT_ASCII(x)
+ #endif
+ #ifndef PyString_AS_STRING
+-#define PyString_AS_STRING (char *)_PyUnicode_COMPACT_DATA
++#define PyString_AS_STRING PyBytes_AS_STRING
+ #endif
+ #ifndef PyString_GET_SIZE
+ #define PyString_GET_SIZE PyUnicode_GET_LENGTH

graalpython/lib-graalpython/patches/pythran/pythran-0.13.patch

@@ -104,10 +104,10 @@ index 00000000..afa33ecc
 +    with env_vars(scipy_build_env):
 +        return mesonpy.build_sdist(sdist_directory, config_settings=config_settings)
 diff --git a/pyproject.toml b/pyproject.toml
-index 454a3c2e..370f0e8e 100644
+index 454a3c2e..a4157fea 100644
 --- a/pyproject.toml
 +++ b/pyproject.toml
-@@ -8,7 +8,9 @@
+@@ -8,55 +8,21 @@
  #     "pybind11>=2.4.3,<2.5.0",
 
  [build-system]
@@ -118,7 +118,11 @@ index 454a3c2e..370f0e8e 100644
  requires = [
      "meson-python>=0.11.0,<0.13.0",
      "Cython>=0.29.32,<3.0",
-@@ -19,44 +21,8 @@ requires = [
+     # conservatively avoid issues from
+     # https://github.com/pybind/pybind11/issues/4420
+     "pybind11==2.10.1",
+-    "pythran>=0.12.0,<0.13.0",
++    "pythran>=0.13.0",
      # `wheel` is needed for non-isolated builds, given that `meson-python`
      # doesn't list it as a runtime requirement (at least in 0.5.0)
      "wheel<0.39.0",