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import: command not found while install numpy package #548

@suiwenfeng

Description

@suiwenfeng

How to reproduce?

follow the official doc to use graalpy & numpy in maven project.

> pom configuration

      <graalpy.version>24.2.0</graalpy.version>
      ...
      <plugin>
        <groupId>org.graalvm.python</groupId>
        <artifactId>graalpy-maven-plugin</artifactId>
        <version>${graalpy.version}</version>
          ...
          <packages>
            ...
            <package>numpy==2.0.2</package>
          </packages>
          ...
      </plugin>

> environment

$ sw_vers
ProductName: macOS
ProductVersion: 15.5
BuildVersion: 24F74

$ java --version
java 24 2025-03-18
Java(TM) SE Runtime Environment Oracle GraalVM 24+36.1 (build 24+36-jvmci-b01)
Java HotSpot(TM) 64-Bit Server VM Oracle GraalVM 24+36.1 (build 24+36-jvmci-b01, mixed mode, sharing)

$ python --version
Python 3.11.13

$ cython --version
Cython version 3.1.4

> error log

      [118/322] Generating 'numpy/_core/_multiarray_umath.graalpy242-311-native-aarch64-darwin.so.p/templ_common.h'
      WARNING: A terminally deprecated method in sun.misc.Unsafe has been called
      WARNING: sun.misc.Unsafe::objectFieldOffset has been called by com.oracle.truffle.runtime.hotspot.HotSpotTruffleRuntime (file:/Users/10005612/.m2/repository/org/graalvm/truffle/truffle-runtime/24.2.0/truffle-runtime-24.2.0.jar)
      WARNING: Please consider reporting this to the maintainers of class com.oracle.truffle.runtime.hotspot.HotSpotTruffleRuntime
      WARNING: sun.misc.Unsafe::objectFieldOffset will be removed in a future release
      [119/322] Compiling Cython source numpy/random/_bounded_integers.pyx
      FAILED: [code=2] numpy/random/_bounded_integers.graalpy242-311-native-aarch64-darwin.so.p/numpy/random/_bounded_integers.pyx.c
      cython -M --fast-fail -3 numpy/random/_bounded_integers.pyx -o numpy/random/_bounded_integers.graalpy242-311-native-aarch64-darwin.so.p/numpy/random/_bounded_integers.pyx.c
      /private/var/folders/1n/bhj601b52nl1rfz9nvw1tr_46nf24r/T/pip-build-env-kuu27pz5/overlay/bin/cython: line 3: import: command not found
      /private/var/folders/1n/bhj601b52nl1rfz9nvw1tr_46nf24r/T/pip-build-env-kuu27pz5/overlay/bin/cython: line 4: import: command not found
      /private/var/folders/1n/bhj601b52nl1rfz9nvw1tr_46nf24r/T/pip-build-env-kuu27pz5/overlay/bin/cython: line 5: from: command not found
      /private/var/folders/1n/bhj601b52nl1rfz9nvw1tr_46nf24r/T/pip-build-env-kuu27pz5/overlay/bin/cython: line 7: syntax error near unexpected token `('
      /private/var/folders/1n/bhj601b52nl1rfz9nvw1tr_46nf24r/T/pip-build-env-kuu27pz5/overlay/bin/cython: line 7: `    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])'
      [120/322] Compiling C object numpy/random/libnpyrandom.a.p/src_distributions_random_hypergeometric.c.o

full.log is here

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