Repositories list

• datajoint-python

  Public
  Relational data pipelines for the science lab

  mysqlpythonpostgresql+ 15

  mysqlpythonpostgresqldeclarativeneurosciencedata-engineeringscientific-computingreproducibilitydata-pipelinesworkflow-management+ 8

  Python

  •

  Apache License 2.0

  •96•191•5•4•Updated Mar 27, 2026Mar 27, 2026

• dj-zarr-codecs

  Public
  DataJoint codecs for Zarr array storage

  Python

  •

  MIT License

  •1•0•0•1•Updated Mar 27, 2026Mar 27, 2026

• datajoint-docs

  Public
  Landing Page for DataJoint Documentation

  Jupyter Notebook

  •

  Other

  •11•6•0•1•Updated Mar 14, 2026Mar 14, 2026

• element-interface

  Public
  Common functions for the DataJoint Elements

  Python

  •

  MIT License

  •16•3•9•2•Updated Mar 12, 2026Mar 12, 2026

• pharus

  Public
  Pharus is a generic REST API server backend for DataJoint pipelines built on top of flask, datajoint, and pyjwt.

  flaskdatajoint

  flaskdatajoint

  Python

  •

  MIT License

  •15•3•17•1•Updated Feb 12, 2026Feb 12, 2026

• lcms-demo

  Public
  Demo DataJoint pipeline for LC-MS data processing

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Feb 6, 2026Feb 6, 2026

• element-miniscope

  Public
  DataJoint Element for miniscope calcium imaging analysis with CaImAn

  Jupyter Notebook

  •

  MIT License

  •15•2•2•2•Updated Feb 4, 2026Feb 4, 2026

• figpack

  Public
  A Python package for creating shareable, interactive, browser-based visualizations

  TypeScript

  •

  Apache License 2.0

  •1•0•0•0•Updated Jan 30, 2026Jan 30, 2026

• ecephys_spike_sorting

  Public archive
  Modules for processing extracellular electrophysiology data from Neuropixels probes

  Python

  •

  Other

  •103•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• workflow-zstack

  Public archive
  Example DataJoint workflow for volumetric data analysis using BossDB

  Jupyter Notebook

  •

  MIT License

  •2•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• workflow-optogenetics

  Public archive
  Example DataJoint workflow for optogenetics research

  Jupyter Notebook

  •

  MIT License

  •3•1•0•0•Updated Jan 21, 2026Jan 21, 2026

• sciops-summit-2024

  Public archive
  DataJoint SciOps Summit - Schedule

  1•1•0•0•Updated Jan 21, 2026Jan 21, 2026

• sciops-workshop

  Public archive
  DataJoint SciOps Workshop

  2•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• compress-ephys

  Public archive
  Compression for array electrophysiology

  1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• otumat

  Public archive
  A suite of maintainer tools and utilities for pip packages.

  Python

  •

  MIT License

  •5•1•4•1•Updated Jan 21, 2026Jan 21, 2026

• blog

  Public archive
  3•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• djarchive-client

  Public archive
  DataJoint Archive Client

  Python

  •7•0•2•0•Updated Jan 21, 2026Jan 21, 2026

• datajoint-dashboard

  Public archive
  Developing tool to build a Plotly Dash app for a DataJoint pipeline

  Python

  •4•3•2•1•Updated Jan 21, 2026Jan 21, 2026

• datajoint-addons

  Public archive
  Addons for datajoint-python

  Python

  •

  GNU Lesser General Public License v3.0

  •1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• datajoint_connection_hub-python

  Public archive
  This is an official DataJoint Python plugin for connection to DJNeuro's hosted instances.

  Python

  •

  MIT License

  •1•1•0•2•Updated Jan 21, 2026Jan 21, 2026

• dj-python-101

  Public archive
  Reference tutorial notebooks for DataJoint (under active development - October 2019)

  Jupyter Notebook

  •1•2•0•0•Updated Jan 21, 2026Jan 21, 2026

• GHToolbox

  Public archive
  `ghtb` provides a simple way to manage toolbox installation of open-source MATLAB Community Toolboxes linked to GitHub (via Releases).

  MATLAB

  •

  MIT License

  •1•1•2•0•Updated Jan 21, 2026Jan 21, 2026

• datajoint-paper

  Public archive
  LaTeX code and figures for the publication submission

  TeX

  •1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• dj-figpack-codecs

  Public
  DataJoint codec for storing figpack visualizations in schema-addressed OAS

  Python

  •

  Other

  •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• dj-photon-codecs

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 17, 2026Jan 17, 2026

• djlabhub-docker

  Public
  A docker image optimized for deploying to JupyterHub a JupyterLab environment with DataJoint Python.

  Python

  •5•3•6•1•Updated Jan 16, 2026Jan 16, 2026

• datajoint-book

  Public
  The DataJoint Book

  Jupyter Notebook

  •

  Other

  •3•0•0•0•Updated Jan 14, 2026Jan 14, 2026

• datajoint-specs

  Public
  DataJoint Specifications

  Creative Commons Attribution Share Alike 4.0 International

  •2•2•0•0•Updated Jan 14, 2026Jan 14, 2026

• datajoint-tutorials

  Public
  Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

  Jupyter Notebook

  •154•14•1•0•Updated Jan 14, 2026Jan 14, 2026

• .github

  Public
  Organizational default configs for @datajoint repos

  MIT License

  •4•0•0•0•Updated Jan 14, 2026Jan 14, 2026