Repositories list

• GitHub-Guide

  Public template
  GitHub Guide developed by NMFS Open Science

  Lua

  •

  Other

  •2•5•6•0•Updated Mar 11, 2026Mar 11, 2026

• NMFSHackDays-2026

  Public
  tutorials and material from HackDays 2026

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •0•0•1•0•Updated Mar 6, 2026Mar 6, 2026

• py-rocket-geospatial-2

  Public
  The Python-R Geospatial image

  R

  •

  Apache License 2.0

  •0•1•3•0•Updated Feb 19, 2026Feb 19, 2026

• py-rocket-base

  Public
  base jupyterhub image with Python and R. See packages for the images.

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•6•9•0•Updated Feb 18, 2026Feb 18, 2026

• zenodo-release

  Public
  Automated releases to zenodo without granting admin access to webhooks

  Python

  •

  MIT License

  •4•0•0•0•Updated Feb 14, 2026Feb 14, 2026

• container-images

  Public template
  The docker stack for data science applications for NOAA Fisheries

  Dockerfile

  •

  Apache License 2.0

  •6•12•10•0•Updated Feb 12, 2026Feb 12, 2026

• py-rocket-template

  Public template
  A template for using py-rocket-base for creating Docker image for JupyterHubs

  Dockerfile

  •0•0•0•0•Updated Feb 10, 2026Feb 10, 2026

• CloudComputingSetup

  Public
  This repository details cloud computing resources at NOAA Fisheries, with a focus on Google Cloud Workstations for R users.

  R

  •0•5•1•0•Updated Jan 21, 2026Jan 21, 2026

• NOAAHackDays

  Public template
  Tutorials and content for Hackdays and Hackhours

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •2•5•5•0•Updated Jan 13, 2026Jan 13, 2026

• NMFSHackDays-2025

  Public
  Material for HackDays and HackHours

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •4•1•8•0•Updated Nov 5, 2025Nov 5, 2025

• EDMW-tutorials-2025

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Oct 2, 2025Oct 2, 2025

• EDMW-EarthData-Workshop-2025

  Public
  EDMW 2025 - Introduction to using PACE Hyperspectral data in the cloud for scientific workflows

  Jupyter Notebook

  •

  MIT License

  •0•0•1•0•Updated Oct 2, 2025Oct 2, 2025

• GitHub-Clinic

  Public
  Material for NMFS GitHub Clinic

  SCSS

  •

  Creative Commons Zero v1.0 Universal

  •1•1•2•0•Updated Sep 26, 2025Sep 26, 2025

• PSAW2025-Quarto-Workshop

  Public
  SCSS

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Sep 9, 2025Sep 9, 2025

• GitHub-Clinic-demos

  Public
  Demo repository for NMFS GitHub Clinic tutorials

  19•0•1•2•Updated Aug 28, 2025Aug 28, 2025

• NOAA-NMFS-Brand-Resources

  Public
  NOAA-NMFS Brand Resources. Collection of color palettes, logos, and icons.

  pythoncolorpalette+ 6

  pythoncolorpalettecolor-schemecolor-palettenoaalogosbranding-assetsnmfs

  Jupyter Notebook

  •

  Apache License 2.0

  •3•16•7•0•Updated Aug 13, 2025Aug 13, 2025

• pangeo-hub-image

  Public template
  demo of a image using pangeo notebook

  Dockerfile

  •0•0•0•0•Updated Aug 6, 2025Aug 6, 2025

• cloud-data-guide

  Public
  Lua

  •

  Other

  •0•0•0•0•Updated Jul 21, 2025Jul 21, 2025

• NMFS-R-UG-Meetings

  Public
  Folders for NMFS R UG meetings are here

  0•0•0•0•Updated Jun 3, 2025Jun 3, 2025

• nmfs-connect

  Public
  Resources and issue tracker for the NMFS posit connect instance.

  issue-trackernoaanmfs

  issue-trackernoaanmfs

  0•13•0•0•Updated May 30, 2025May 30, 2025

• image-acoustics

  Public
  image for acoustics work with echopype

  Dockerfile

  •

  Apache License 2.0

  •0•0•0•0•Updated May 15, 2025May 15, 2025

• cefi-image

  Public
  JupyterHub compatible image

  Apache License 2.0

  •0•0•0•0•Updated Apr 12, 2025Apr 12, 2025

• ResourceBook

  Public template
  On online resource book from the NMFS Open Science community

  documentationopen-sciencequarto+ 1

  documentationopen-sciencequartoquartopub

  Lua

  •

  Creative Commons Attribution 4.0 International

  •4•5•3•1•Updated Apr 10, 2025Apr 10, 2025

• .github

  Public
  Apache License 2.0

  •3•0•0•0•Updated Mar 21, 2025Mar 21, 2025

• nmfs-opensci.github.io

  Public
  website for NMFS OpenScience

  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Mar 21, 2025Mar 21, 2025

• zenodo-gha

  Public
  A GitHub Action to create a release on Zenodo when a GitHub release is published.

  Python

  •

  MIT License

  •0•3•2•0•Updated Feb 12, 2025Feb 12, 2025

• NOAA-quarto-simple

  Public template
  A template for a simple Quarto website that looks like a online book

  quartoquartopubquarto-template

  quartoquartopubquarto-template

  Lua

  •

  Creative Commons Zero v1.0 Universal

  •21•31•2•1•Updated Feb 11, 2025Feb 11, 2025

• pkgdownTemplate

  Public template
  Clone this repo to create a NMFS branded pkgdown website

  R

  •

  Other

  •4•8•3•0•Updated Jan 29, 2025Jan 29, 2025

• quarto_titlepages

  Public
  A Quarto extension for making title and cover pages for PDF output.

  pdflatex-templatenmfsopensci-templates

  pdflatex-templatenmfsopensci-templates

  TeX

  •

  Creative Commons Zero v1.0 Universal

  •29•158•11•0•Updated Jan 15, 2025Jan 15, 2025

• NOAA-tech-memo-template

  Public template
  DRAFT. Quarto template to create a pdf with the elements for a NOAA tech memo

  noaaquartoquartopub+ 1

  noaaquartoquartopubquarto-template

  TeX

  •

  Creative Commons Zero v1.0 Universal

  •1•8•6•0•Updated Jan 15, 2025Jan 15, 2025