Skip to content

@nmfs-ost Office of Science & Technology at NOAA Fisheries

Change the repository type filter

All

    Repositories list

    102 repositories

    • stockplotr

      Public
      R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of …
      R
      •
      Other
      •5•11•17•3•Updated Mar 13, 2026Mar 13, 2026

    • workflows-guidebook

      Public
      Lua
      •
      Creative Commons Zero v1.0 Universal
      •0•2•0•0•Updated Mar 13, 2026Mar 13, 2026

    • AA-SI_KMeans

      Public
      Performs inter-frequency K-Means clustering on acoustic data using echopype
      machine-learningtaxonomykmeans-clustering
      machine-learningtaxonomykmeans-clusteringexpirimentalechosounders
      Python
      •
      MIT License
      •0•0•2•0•Updated Mar 13, 2026Mar 13, 2026

    • AA-SI_aalibrary

      Public
      A python library used for fetching acoustics data.
      Python
      •
      Apache License 2.0
      •2•5•0•0•Updated Mar 13, 2026Mar 13, 2026

    • SSMSE

      Public
      Management Strategy Evaluation (MSE) using Stock Synthesis (SS3)
      stock-synthesis
      stock-synthesis
      R
      •
      MIT License
      •12•21•26•0•Updated Mar 13, 2026Mar 13, 2026

    • ss3-source-code

      Public
      The source code for Stock Synthesis (SS3).
      fisheriesstockassessmentstock-synthesis
      fisheriesstockassessmentstock-synthesisnoaa-nsap
      C++
      •
      Creative Commons Zero v1.0 Universal
      •20•44•91•2•Updated Mar 12, 2026Mar 12, 2026

    • ss3-test-models

      Public
      Stock Synthesis models used for testing
      fisheriesstock-synthesisnoaa-nsap
      fisheriesstock-synthesisnoaa-nsap
      Scheme
      •
      Creative Commons Zero v1.0 Universal
      •1•3•13•0•Updated Mar 11, 2026Mar 11, 2026

    • ss3-user-examples

      Public
      Stock synthesis example models for users
      fisheriesstock-synthesisnoaa-nsap
      fisheriesstock-synthesisnoaa-nsap
      Scheme
      •
      Creative Commons Zero v1.0 Universal
      •5•2•8•0•Updated Mar 11, 2026Mar 11, 2026

    • asar

      Public
      Partially automate a U.S. stock assessment report.
      latexr-packagestock-assessment
      latexr-packagestock-assessmentquartostock-assessment-reportsnoaa-nsap
      R
      •
      MIT License
      •10•35•12•3•Updated Mar 10, 2026Mar 10, 2026

    • PAM_towed_array

      Public
      PAM Towed Arrays for NOAA Fisheries
      JavaScript
      •
      Creative Commons Zero v1.0 Universal
      •0•0•2•0•Updated Mar 9, 2026Mar 9, 2026

    • AA-SI_Echoview

      Public
      Python programs and other files for AA-SI implementation of Echoview in a Windows cloud VM
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 9, 2026Mar 9, 2026

    • ss3-doc

      Public
      Source code for the Stock Synthesis manual and other documentation
      latexstock-synthesisnoaa-nsap
      latexstock-synthesisnoaa-nsap
      TeX
      •
      Creative Commons Zero v1.0 Universal
      •3•3•9•2•Updated Mar 9, 2026Mar 9, 2026

    • journals

      Public
      Bibliography files for journals of interest to fisheries
      noaa-nsap
      noaa-nsap
      TeX
      •
      GNU General Public License v3.0
      •0•16•6•1•Updated Mar 9, 2026Mar 9, 2026

    • PAM-Stocks

      Public
      Summary of NOAA-NMFS Passive Acoustic Monitoring- Stocks Research
      JavaScript
      •
      Creative Commons Zero v1.0 Universal
      •0•0•2•0•Updated Mar 4, 2026Mar 4, 2026

    • AGEPRO-CoreLib

      Public
      AGEPRO CoreLib (Core Library) is a object-oriented helper library for AGEPRO-GUI, that is designed to handle data structures from AGEPRO VERSION 4.25 and AGEPRO…
      C#
      •
      Other
      •0•0•0•0•Updated Mar 4, 2026Mar 4, 2026

    • AGEPRO-GUI

      Public
      A redesign of the NOAA Fisheries National Fisheries Toolbox interface (by Alan Seaver). Includes AGEPRO Calculation Engine version 4.25.
      C#
      •
      Other
      •1•2•1•0•Updated Mar 4, 2026Mar 4, 2026

    • DisMAP

      Public
      The Distribution Mapping and Analysis Portal is a national web application which displays spatial distribution data for over 400 marine fish and macroinvertebra…
      noaa-nsap
      noaa-nsap
      Python
      •5•8•0•0•Updated Mar 4, 2026Mar 4, 2026

    • FIT_web_templating

      Public
      Templates and JSON model data for the toolbox web pages
      HTML
      •0•1•28•0•Updated Mar 4, 2026Mar 4, 2026

    • noaa-fit-resources

      Public
      Source code for the FIT software development resources
      CSS
      •
      The Unlicense
      •6•1•8•0•Updated Mar 2, 2026Mar 2, 2026

    • ghactions4r

      Public
      Reusable github actions workflows for R packages
      rnoaagithub-actions
      rnoaagithub-actionsnoaa-fisheries
      R
      •1•16•13•1•Updated Mar 2, 2026Mar 2, 2026

    • noaa-fit

      Public
      Repo for storing the hosted site of the NOAA Fisheries Integrated Toolbox
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 27, 2026Feb 27, 2026

    • noaa-fit-dev

      Public
      Repo for holding rendered files for the development version of the FIT site.
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 27, 2026Feb 27, 2026

    • workflows-workshop

      Public
      Home to the agenda, materials, and communication for the stock assessment workflows workshops being held in 2026.
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•4•0•1•Updated Feb 26, 2026Feb 26, 2026

    • PAM-Glider

      Public
      Summary of NOAA Fisheries PAM equipped Glider Research.
      SCSS
      •
      Creative Commons Zero v1.0 Universal
      •1•2•23•0•Updated Feb 23, 2026Feb 23, 2026

    • ageproR

      Public
      Developing R package for AGEPRO (Age Structure Projection Model) with Prototype JSON data format.
      R
      •
      GNU General Public License v3.0
      •0•1•11•0•Updated Feb 18, 2026Feb 18, 2026

    • PAM-acodet-batchScale

      Public
      automatic detection of vocalizing animals in acoustic datasets
      Python
      •
      MIT License
      •2•0•0•14•Updated Feb 11, 2026Feb 11, 2026

    • Optics-SI-Main

      Public
      This repo is main landing page for the Optics Strategic Initiative. Includes vision statements and proposals, project planning and management, and ties to indi…
      Other
      •1•0•6•0•Updated Feb 10, 2026Feb 10, 2026

    • surveyresamplr

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•10•0•Updated Feb 5, 2026Feb 5, 2026

    • PAM-OpenScience

      Public
      Instructions and Templates for working with Open Science
      JavaScript
      •
      Creative Commons Zero v1.0 Universal
      •2•5•8•1•Updated Feb 3, 2026Feb 3, 2026

    • Genomics_Resources

      Public
      HTML
      •
      Creative Commons Attribution 4.0 International
      •2•5•0•0•Updated Feb 3, 2026Feb 3, 2026