Open Problems in Single-Cell Analysis
30 packages
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control_methods/permute_celltype_annotationsPublished
Sep 13, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing342 -
methods/scprintPublished
Jan 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection341 -
methods_transcript_assignment/comsegPublished
Sep 19, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing336 -
methods/harmonypyPublished
Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration329 -
methods/xgboostPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection328 -
control_methods/shuffle_integration_by_cell_typePublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration328 -
control_methods/shuffle_integrationPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration326 -
methods_transcript_assignment/prosegPublished
Sep 22, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing324 -
control_methods/shuffle_integration_by_batchPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration321 -
methods/ligerPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration318 -
methods/bbknnPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration314 -
methods/batchelor_fastmnnPublished
Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration313 -
control_methods/no_integrationPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration311 -
methods/scviPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration309 -
control_methods/true_labelsPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection307 -
methods/combatPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration306 -
methods/scanviPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration306 -
control_methods/embed_cell_types_jitteredPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration304 -
methods/scalexPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration304 -
control_methods/no_integration_batchPublished
Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration304 -
control_methods/embed_cell_typesPublished
Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration303 -
stability_analysis/permute_grnPublished
Mar 12, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference295 -
control_methods/majority_votePublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection293 -
control_methods/positive_controlPublished
Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference288 -
data_processors/process_datasetPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration288 -
methods_segmentation/cellposePublished
Nov 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing288 -
methods/seurat_transferdataPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection287 -
methods/scanvi_scarchesPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection286