I have a Quarto file set up to create a website. The local version works and shows plots. The QuartoPub version does not include the plots (just empty squares).

[sjyates]

Description

I have a Quarto file set up to create a website. The local version works and shows plots. The QuartoPub version does not include the plots (just empty squares). Here is the code in the Quarto file for an example plot:

#| echo: false
#| label: fig-uoa-34-weighted-power
#| output: asis
#| warning: false
#| fig-cap: "Performance improvement 2014 - 2021"

ggplot(Overall, aes(zRPower, zGPA, size = Shares, fill = RG)) +
  geom_point(alpha = 0.5,
             shape = 21,
             color = "black") +
  scale_size(range = c(.1, 10), name = "Shares") +
  geom_text_repel(
    aes(label = Liverpool, size = 30),
    min.segment.length = unit(0, 'lines'),
    nudge_y = .2
  ) +
  theme_minimal() +
  labs(title = Plot_title,
       subtitle = paste("Distance moved ", round(tdm, 2), " SD")) +
  ylab("GPA") +
  xlab("Weighted power")

And here is my YAML file to build website:

project:
type: website

website:
title: "Analysis"
navbar:
left:
- 'Unit 34 Report.qmd'

I am running the most recent versions of R, Quarto and R-studio

Many thanks for any advice.

[mcanouil]

Could you properly format your post using code blocks for code and terminal outputs? Thanks.
If your code contains code blocks, you need to enclose it using more backticks, i.e., usually four ````.
See https://quarto.org/bug-reports.html#formatting-make-githubs-markdown-work-for-us.

Could you share a small self-contained "working" (reproducible) example to work with, i.e., a complete Quarto document or a Git repository? The goal is to make it as easy as possible for us to recreate your problem so that we can fix it: please help us help you! Thanks.

---

You can share a self-contained "working" (reproducible) Quarto document using the following syntax, i.e., using more backticks than you have in your document (usually four ````).
See https://quarto.org/bug-reports.html#small-is-beautiful-aim-for-a-single-document-with-10-lines.

If you have multiple files (and if it is absolutely required to have multiple files), please share as a Git repository.

R	Python
````qmd --- title: "Reproducible Quarto Document" format: html engine: knitr --- This is a reproducible Quarto document. {{< lipsum 1 >}} ```{r} x <- c(1, 2, 3, 4, 5) y <- c(1, 4, 9, 16, 25) plot(x, y) ``` {#fig-placeholder} {{< lipsum 1 >}} The end after @fig-placeholder. ````	````qmd --- title: "Reproducible Quarto Document" format: html engine: jupyter --- This is a reproducible Quarto document. {{< lipsum 1 >}} ```{python} import matplotlib.pyplot as plt x = [1, 2, 3, 4, 5] y = [1, 4, 9, 16, 25] plt.plot(x, y) plt.show() ``` {#fig-placeholder} {{< lipsum 1 >}} The end after @fig-placeholder. ````

Additionally and if not already given, please share the output of quarto check within a code block (i.e., using three backticks ```txt), see https://quarto.org/bug-reports.html#check.

[sjyates]

Actually, I was about to log back in and say I have resolved this.  IT appears to be an issue with the extension I am using, having removed it all is well. Simeon. From: Mickaël Canouil ***@***.***> Reply to: quarto-dev/quarto-cli ***@***.***> Date: Wednesday, 7 January 2026 at 15:31 To: quarto-dev/quarto-cli ***@***.***> Cc: Simeon Yates ***@***.***>, Author ***@***.***> Subject: Re: [quarto-dev/quarto-cli] I have a Quarto file set up to create a website. The local version works and shows plots. The QuartoPub version does not include the plots (just empty squares). (Discussion #13854) Could you properly format your post using code blocks for code and terminal outputs? Thanks. If your code contains code blocks, you need to enclose it using more backticks, i.e., usually four ````. See https://quarto.org/bug-reports.html#formatting-make-githubs-markdown-work-for-us. Could you share a small self-contained "working" (reproducible) example to work with, i.e., a complete Quarto document or a Git repository? The goal is to make it as easy as possible for us to recreate your problem so that we can fix it: please help us help you! Thanks. You can share a self-contained "working" (reproducible) Quarto document using the following syntax, i.e., using more backticks than you have in your document (usually four ````). See https://quarto.org/bug-reports.html#small-is-beautiful-aim-for-a-single-document-with-10-lines. If you have multiple files (and if it is absolutely required to have multiple files), please share as a Git repository. RPython ````qmd --- title: "Reproducible Quarto Document" format: html engine: knitr --- This is a reproducible Quarto document. {{< lipsum 1 >}} ```{r} x <- c(1, 2, 3, 4, 5) y <- c(1, 4, 9, 16, 25) plot(x, y) ``` {#fig-placeholder} {{< lipsum 1 >}} The end after @fig-placeholder. ```` ````qmd --- title: "Reproducible Quarto Document" format: html engine: jupyter --- This is a reproducible Quarto document. {{< lipsum 1 >}} ```{python} import matplotlib.pyplot as plt x = [1, 2, 3, 4, 5] y = [1, 4, 9, 16, 25] plt.plot(x, y) plt.show() ``` {#fig-placeholder} {{< lipsum 1 >}} The end after @fig-placeholder. ```` Additionally and if not already given, please share the output of quarto check within a code block (i.e., using three backticks ```txt), see https://quarto.org/bug-reports.html#check. — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: ***@***.***>