Repositories list

• docs

  Public
  Source code for the Seqera documentation portal.

  MDX

  •66 forks•33 stars•2222 issues•2222 pull requests•Updated Sep 24, 2026Sep 24, 2026

• nf-metro

  Public
  Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows

  workflowbioinformaticspipeline+ 9

  workflowbioinformaticspipelinenextflowdiagramgraphicsillustrationmetro-mapnf-coreseqera+ 2

  Python

  •

  MIT License

  •77 forks•5555 stars•140140 issues•88 pull requests•Updated Sep 24, 2026Sep 24, 2026

• showcase-automation

  Public
  Python

  •00 forks•00 stars•99 issues•66 pull requests•Updated Sep 24, 2026Sep 24, 2026

• helm-charts

  Public
  Seqera public Helm charts

  devopshelmhelm-charts

  devopshelmhelm-charts

  Go Template

  •

  Apache License 2.0

  •00 forks•11 star•22 issues•11 pull request•Updated Sep 24, 2026Sep 24, 2026

• libseqera

  Public
  Library for Java & Groovy modules shared across Seqera projects

  Groovy

  •

  Apache License 2.0

  •33 forks•44 stars•44 issues•33 pull requests•Updated Sep 24, 2026Sep 24, 2026

• wave

  Public
  On-demand containers provisioning service

  dockerkubernetesnextflow+ 2

  dockerkubernetesnextflowcontainerssingularity

  Groovy

  •

  GNU Affero General Public License v3.0

  •1414 forks•6060 stars•4444 issues•2222 pull requests•Updated Sep 24, 2026Sep 24, 2026

• cx-field-tools-installer

  Public
  Unofficial Terraform solution to help clients install Seqera Platform

  Python

  •

  Apache License 2.0

  •44 forks•55 stars•105105 issues•1515 pull requests•Updated Sep 24, 2026Sep 24, 2026

• terraform-provider-seqera

  Public
  Go

  •

  Apache License 2.0

  •33 forks•66 stars•1111 issues•22 pull requests•Updated Sep 23, 2026Sep 23, 2026

• nf-jdk

  Public
  Seqera JDK base image

  Shell

  •00 forks•00 stars•44 issues•00 pull requests•Updated Sep 22, 2026Sep 22, 2026

• zvec-java

  Public
  Java

  •

  Apache License 2.0

  •11 fork•33 stars•11 issue•33 pull requests•Updated Sep 22, 2026Sep 22, 2026

• RustQC

  Public
  Fast genomics quality control tools for sequencing data, written in Rust.

  rustbioinformaticsanalysis+ 6

  rustbioinformaticsanalysisspeedrnaseqnf-coreefficienrewrite-it-in-rustrewrites-bio

  Rust

  •

  GNU General Public License v3.0

  •77 forks•125125 stars•1616 issues•4747 pull requests•Updated Sep 22, 2026Sep 22, 2026

• nf-slack

  Public
  Nextflow plugin for Slack messages

  Groovy

  •

  Apache License 2.0

  •00 forks•33 stars•77 issues•88 pull requests•Updated Sep 22, 2026Sep 22, 2026

• maven-oci-registry

  Public
  Like "maven-publish" for Gradle but using OCI registry as storage

  Java

  •

  Apache License 2.0

  •11 fork•44 stars•11 issue•22 pull requests•Updated Sep 22, 2026Sep 22, 2026

• nf-pipelines

  Public
  Nextflow

  •

  MIT License

  •00 forks•11 star•11 issue•33 pull requests•Updated Sep 22, 2026Sep 22, 2026

• nf-canary

  Public
  A minimal Nextflow workflow for testing infrastructure.

  HTML

  •

  MIT License

  •1010 forks•66 stars•55 issues•66 pull requests•Updated Sep 22, 2026Sep 22, 2026

• wave-cli

  Public
  Command line tool for Wave containers provisioning service

  dockerkubernetescontainers+ 3

  dockerkubernetescontainerscondasingularityspack

  Java

  •

  Apache License 2.0

  •44 forks•1919 stars•77 issues•44 pull requests•Updated Sep 22, 2026Sep 22, 2026

• wave-showcase

  Public
  Examples showing how to configure Nextflow to run with Wave containers provisioning service

  dockernextflowcontainers

  dockernextflowcontainers

  Nextflow

  •55 forks•2121 stars•22 issues•22 pull requests•Updated Sep 22, 2026Sep 22, 2026

• tower-agent

  Public
  Agent app that allows connecting remote batch schedulers to Seqera Platform

  nextflow

  nextflow

  Java

  •

  Apache License 2.0

  •66 forks•1111 stars•1111 issues•00 pull requests•Updated Sep 22, 2026Sep 22, 2026

• migtool

  Public
  No-frills DB migration tool

  Groovy

  •

  Mozilla Public License 2.0

  •11 fork•11 star•55 issues•88 pull requests•Updated Sep 22, 2026Sep 22, 2026

• tower-cli

  Public
  Nextflow Tower CLI tool

  Java

  •

  Apache License 2.0

  •1111 forks•5555 stars•8181 issues•88 pull requests•Updated Sep 22, 2026Sep 22, 2026

• nf-aggregate

  Public
  Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform

  workflowpipelinenextflow+ 2

  workflowpipelinenextflowqcseqera

  Python

  •

  MIT License

  •1010 forks•88 stars•66 issues•99 pull requests•Updated Sep 21, 2026Sep 21, 2026

• seqera-cli

  Public
  Release repo for the Seqera CLI

  00 forks•11 star•11 issue•00 pull requests•Updated Sep 21, 2026Sep 21, 2026

• criu-static

  Public
  Static build of CRIU (Checkpoint/Restore tool)

  linuxsnapshotcriu+ 2

  linuxsnapshotcriucheckpoint-restorecriu-static

  CMake

  •

  GNU General Public License v2.0

  •00 forks•1010 stars•11 issue•33 pull requests•Updated Sep 21, 2026Sep 21, 2026

• nf-core-tower-azure-poc

  Public
  Shell

  •33 forks•11 star•11 issue•22 pull requests•Updated Sep 21, 2026Sep 21, 2026

• nf-schema-testing

  Public
  Dummy pipeline for testing variations of the Nextflow schema

  Nextflow

  •

  MIT License

  •00 forks•11 star•11 issue•77 pull requests•Updated Sep 20, 2026Sep 20, 2026

• staticreg

  Public
  A frontend application to navigate OCI registries

  registryociregistry-ui

  registryociregistry-ui

  Go

  •

  Apache License 2.0

  •00 forks•55 stars•1111 issues•00 pull requests•Updated Sep 15, 2026Sep 15, 2026

• action-tower-launch

  Public
  GitHub Action to launch a workflow using Seqera Platform

  automationbioinformaticslaunch+ 9

  automationbioinformaticslaunchnextflowpipelinesworkflowstowernf-coregithub-actionsnextflow-tower+ 2

  Shell

  •

  Mozilla Public License 2.0

  •22 forks•00 stars•55 issues•00 pull requests•Updated Sep 14, 2026Sep 14, 2026

• custom-studios-examples

  Public
  This repository contains examples of Dockerfiles for custom Seqera studio applications.

  Dockerfile

  •11 fork•55 stars•11 issue•66 pull requests•Updated Sep 13, 2026Sep 13, 2026

• rnaseq

  Public
  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Nextflow

  •

  MIT License

  •897897 forks•00 stars•00 issues•00 pull requests•Updated Sep 7, 2026Sep 7, 2026

• nf-proteindesign

  Public
  Nextflow pipeline to do protein design tasks at the end of 2025.

  nextflowgpuprotein-design+ 1

  nextflowgpuprotein-designseqera-ai

  Nextflow

  •

  MIT License

  •66 forks•1111 stars•11 issue•22 pull requests•Updated Sep 7, 2026Sep 7, 2026