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Build the sequence index also for fasta+paf
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src/main.rs

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -197,7 +197,7 @@ impl GfaMafFastaOpts {
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Option<UnifiedSequenceIndex>,
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Option<(u8, u8, u8, u8, u8, u8)>,
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)> {
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let needs_sequence_mandatory = matches!(output_format, "gfa" | "maf" | "fasta");
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let needs_sequence_mandatory = matches!(output_format, "gfa" | "maf" | "fasta" | "fasta+paf");
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let needs_sequence_optional = output_format == "paf" && original_sequence_coordinates;
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let needs_poa = matches!(output_format, "gfa" | "maf");
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