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Package: ECOTOXr
Type: Package
Title: Download and Extract Data from US EPA's ECOTOX Database
Version: 1.2.4
Authors@R: c(person("Pepijn", "de Vries", role = c("aut", "cre", "dtc"),
email = "pepijn.devries@outlook.com",
comment = c(ORCID = "0000-0002-7961-6646")))
Author:
Pepijn de Vries [aut, cre, dtc] (0000-0002-7961-6646)
Maintainer: Pepijn de Vries <pepijn.devries@outlook.com>
Description: The US EPA ECOTOX database is a freely available database
with a treasure of aquatic and terrestrial ecotoxicological data.
As the online search interface doesn't come with an API, this
package provides the means to easily access and search the database
in R. To this end, all raw tables are downloaded from the EPA website
and stored in a local SQLite database <doi:10.1016/j.chemosphere.2024.143078>.
Depends:
R (>= 4.1.0),
RSQLite (>= 2.3.4)
Imports:
crayon (>= 1.5.2),
dbplyr (>= 2.4.0),
dplyr (>= 1.1.4),
httr2 (>= 1.0.0),
jsonlite (>= 1.8.8),
lifecycle (>= 1.0.4),
purrr (>= 1.0.2),
rappdirs (>= 0.3.3),
readr (>= 2.1.4),
readxl (>= 1.4.3),
rlang (>= 1.1.2),
rvest (>= 1.0.3),
stringr (>= 1.5.1),
tibble (>= 3.2.1),
tidyr (>= 1.3.0),
tidyselect (>= 1.2.0),
units (>= 0.8.5),
utils
Suggests:
DBI,
htmltools,
kableExtra,
knitr,
rmarkdown,
standartox,
testthat (>= 3.0.0),
webchem
URL:
https://github.com/pepijn-devries/ECOTOXr,
https://pepijn-devries.github.io/ECOTOXr/,
https://doi.org/10.1016/j.chemosphere.2024.143078
BugReports: https://github.com/pepijn-devries/ECOTOXr/issues
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Config/testthat/edition: 3
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
Collate:
'ECOTOXr-package.r'
'cas_handlers.r'
'database_access.r'
'helpers.r'
'imports.r'
'init.r'
'online.r'
'process_date.r'
'process_unit.r'
'process_numeric.r'
'wrappers.r'