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Checking out tag instead of branch.
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galaxy/package_neptune/tool_dependencies.xml

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<actions>
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<action type="shell_command">git clone https://github.com/phac-nml/neptune.git</action>
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<action type="shell_command">git checkout release/1.2</action>
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<action type="shell_command">git checkout tags/v1.2.2</action>
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<action type="move_directory_files">
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<source_directory>neptune</source_directory>

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