use ML to create ontological relationships and reveal genotype-phenotype connections

[meghalithic]

The idea is broadly:

• use ontology to create relationships (@balhoff help to extract) using phenex
• use relationships to inform ML
• recreate character states
• fill in a character matrix
• cluster phenotypes and genotypes

This idea stemmed from talks with @pmabee, @uyedaj, and Anuj Karpatne, and from reading Pasan Fernando's paper (methods for clustering analyses using ontologies and highlighting candidate genes) and @sergeitarasov (methods for reconstructing character states).

We could also compare the outputs of

[diegosasso]

Nice project! Also interested! :)