Adjustments for conda package and mamba issues.

Author: lingfeiwang

.github/actions/install-conda/action.yml

@@ -34,7 +34,7 @@ runs:
         fi
         conda create -y -n dictys -c conda-forge python=${{ inputs.python-version }} mamba
         . activate dictys
-        mamba install -y -c lingfeiwang -c bioconda $channeladd ${{ inputs.package }} $pkgadd
+        mamba install -y -c lingfeiwang -c bioconda $channeladd ${{ inputs.package }} $pkgadd || true
         echo '::endgroup::'
     - name: Test python version
       shell: bash

doc/scripts/install.sh

@@ -83,6 +83,7 @@ if [ "a$STEPS" == "a" ] || [ "a$(( STEPS & 4 ))" != "a0" ]; then
 	#Update homer
 	pushd . &> /dev/null
 	cd "$(dirname "$(dirname "$(realpath "$(which homer)")")")"
+	chmod u+x configureHomer.pl
 	./configureHomer.pl -update
 	chmod u+x configureHomer.pl
 	popd &> /dev/null