Added option to not use github markdown in processMarkdown

Author: Gareth Aneurin Tribello

pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "PlumedToHTML"
-version = "0.102"
+version = "0.103"
 description = "A package for creating prettified HTML for PLUMED files"
 authors = [{ name = "Gareth Tribello", email = "[email protected]" }]
 maintainers = [{ name = "Daniele Rapetti", email = "[email protected]" }]

src/PlumedToHTML/PlumedToHTML.py

@@ -551,7 +551,7 @@ def processMarkdown( filename, plumedexe, plumed_names, actions, jsondir="./" )
        ninputs, nfail = processMarkdownString( inp, filename, plumedexe, plumed_names, actions, dirname, ofile, jsondir )
     return ninputs, nfail
 
-def processMarkdownString( inp, filename, plumedexe, plumed_names, actions, dirname, ofile, jsondir="./" ) :
+def processMarkdownString( inp, filename, plumedexe, plumed_names, actions, dirname, ofile, jsondir="./", ghmarkdown=True ) :
     """
        Process a string of markdown that contains LUMED input files using PlumedtoHTML
 
@@ -639,7 +639,8 @@ def processMarkdownString( inp, filename, plumedexe, plumed_names, actions, dirn
                             usejson=(not success[-1]),
                             actions=actions )
           # Print the html for the solution
-          ofile.write( "{% raw %}\n" + html + "\n {% endraw %} \n" )
+          if ghmarkdown : ofile.write( "{% raw %}\n" + html + "\n {% endraw %} \n" )
+          else : ofile.write( html )
        # This finds us the solution file
        elif inplumed and "#SOLUTIONFILE=" in line :
           solutionfile=line.strip().replace("#SOLUTIONFILE=","")