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Update: 2025_Lazaridis_Yamnaya (#203)
* update ssf for 2025_Lazaridis_Yamnaya, to include originally missing entries. * [automated] Create package recipe from SSF files --------- Co-authored-by: delphis-bot <delphis-bot@poseidon-adna.org>
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packages/2025_Lazaridis_Yamnaya/2025_Lazaridis_Yamnaya.config

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// Keep track of config versions
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minotaur_release='0.5.0' // The release tag of the poseidon-eager repository used for processing and config file retrieval
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config_template_version='0.5.0'
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package_config_version='0.5.0'
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minotaur_release='1.0.0' // The release tag of the poseidon-eager repository used for processing and config file retrieval
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config_template_version='1.0.0'
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package_config_version='1.0.0'
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minotaur_config_base="https://raw.githubusercontent.com/poseidon-framework/poseidon-eager/${minotaur_release}/conf"
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// This configuration file is designed to be a used with the nf-core/eager pipeline.
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// single file.
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// Load configuration profiles. They are loaded from the minotaur_config_base URL, main branch.
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includeConfig "${minotaur_config_base}/EVA_cluster.config" // Cluster-specific configurations for nf-core/eager execution at MPI-EVA
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// The loaded config includes code that loads the institutional configs from https://github.com/poseidon-framework/minotaur-institutional-configs.
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includeConfig "${minotaur_config_base}/Minotaur.config" // Default nf-core/eager parameters for Minotaur processing.
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// The following config file specifies BED files for on-target endogenous DNA calculation and mean coverage as well as pseudohaploid genotyping.

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