Change locations of profiling sections in the code base to reflect operations being profiled correctly #819
Workflow file for this run
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| name: Run unit tests for user-side functions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - develop | |
| pull_request: | |
| branches: | |
| - "*" | |
| jobs: | |
| unit_tests: | |
| runs-on: ubuntu-latest | |
| container: precice/precice:nightly | |
| steps: | |
| - uses: actions/checkout@v6 | |
| with: | |
| path: micro-manager | |
| - name: Install dependencies | |
| run: | | |
| apt-get -qq update | |
| apt-get -qq install python3-dev python3-venv git pkg-config | |
| - name: Create a virtual environment and install Micro Manager in it | |
| timeout-minutes: 6 | |
| working-directory: micro-manager | |
| run: | | |
| python3 -m venv .venv | |
| . .venv/bin/activate | |
| pip install . | |
| - name: Run micro_manager unit test | |
| working-directory: micro-manager | |
| run: | | |
| . .venv/bin/activate | |
| pip uninstall -y pyprecice | |
| cd tests/unit | |
| python3 -m unittest test_micro_manager.py | |
| - name: Install Micro Manager and run interpolation unit test | |
| working-directory: micro-manager | |
| run: | | |
| . .venv/bin/activate | |
| pip install .[sklearn] | |
| pip uninstall -y pyprecice | |
| cd tests/unit | |
| python3 -m unittest test_interpolation.py | |
| - name: Install Micro Manager and run micro simulation crash unit test | |
| working-directory: micro-manager | |
| run: | | |
| . .venv/bin/activate | |
| cd tests/unit | |
| python3 -m unittest test_micro_simulation_crash_handling.py | |
| - name: Install Micro Manager and run HDF5 read and write unit tests | |
| working-directory: micro-manager/ | |
| run: | | |
| . .venv/bin/activate | |
| pip install .[snapshot] | |
| pip uninstall -y pyprecice | |
| cd tests/unit | |
| python3 -m unittest test_hdf5_functionality.py | |
| - name: Install Micro Manager and run snapshot_computation unit tests | |
| working-directory: micro-manager | |
| run: | | |
| . .venv/bin/activate | |
| cd tests/unit | |
| python3 -m unittest test_snapshot_computation.py |