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Copy file name to clipboardExpand all lines: docs/configuration.md
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@@ -30,10 +30,12 @@ The Micro Manager is configured with a JSON file. An example configuration file
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This example configuration file is in [`examples/micro-manager-config.json`](https://github.com/precice/micro-manager/tree/develop/examples/micro-manager-config.json).
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The path to the file containing the Python importable micro simulation class is specified in the `micro_file_name` parameter. If the file is not in the working directory, give the relative path.
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The path to the file containing the Python importable micro simulation class is specified in the `micro_file_name` parameter. If the file is not in the working directory, give the relative path from the directory where the Micro Manager is executed.
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Set the output [log](tooling-micro-manager-logging.html) directory using the parameter `output_dir`.
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To output the runtime memory usage, set `output_memory_usage` to `True`. This will output a CSV file with the peak memory usage (RSS) in every time window, in MBs.
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There are three main sections in the configuration file, the `coupling_params`, the `simulation_params` and the optional `diagnostics`.
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