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CONTRIBUTING.md

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# Obelisk-py Contribution and Development Guide
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## Technical setup
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This project uses [uv](https://docs.astral.sh/uv/) to manage dependencies,
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Python versions and deployments.
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As a result, all metadata and dependencies are defined in the `pyproject.toml` file.
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`uv` also automatically installs the dev dependencies, so no special handling is needed.
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## Docs
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Docs are in RST format under the `docs` folder.
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Autodoc and autosummary are used to turn docblocks into documentation.
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The online variant follows the main branch.
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The build command boils down to the following:
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```sh
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uv run sphinx-build -M html docs/source/ docs/build/
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```
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We recommend running `python -m http.server` in the docs output folder to easily view the resulting docs during development.
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## Checks and tests
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We ship a ruff linting and format config in the pyproject,
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as well as a mypy typing setup.
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All three of these are ran in CI and, if enabled, in a pre-commit hook.
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Be careful to not accidentally break our Python version tolerance.
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The hooks can be enabled on UNIX-like systems by setting `git config core.hooksPath hooks/` in the root of this repository.
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You may run the full checks as follows:
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```sh
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uv run ruff format --check
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uv run ruff check
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uv run mypy
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```
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We expect new code to contain as much docblocks as possible and type annotations.
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User-facing API _must_ have type annotations.
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Additionally, the `src/tests` folder contains basic testing,
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which can be ran easily ran using `uv run pytest`.
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It is recommended to at least add basic "can I initialize" tests for new code.
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## Workflows
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Our GitHub Actions setup consists of three workflows.
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The CI workflow runs on any PR or push to main,
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and runs the above mentioned checks and tests.
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Format, lint and type checking is ran on Linux, for several supported Python versions.
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The test suite is ran on MacOS, Linux and Windows, matrixed for the same set of Python versions.
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No code gets merged that breaks this lint.
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The sphinx workflow builds docs from main and deploys to GitHub Pages.
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Pypi publishing is handled using PyPi Trusted Publishing using the pypi workflow on tag creation.
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## Governance and conduct
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This project is intended for and maintained by researchers of [PreDiCT](https://predict.idlab.ugent.be/).
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Community contributions and bug reports are welcome, but subject to review and prioritisation by PreDiCT.
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Obelisk-py is not directly maintained or supported by the Obelisk team.
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Please behave in the official channels as you would in a professional research setting.

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