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<!DOCTYPE html>
<html lang="en">
<head>
<!-- meta -->
<meta charset="UTF-8">
<title>Utah Transcriptome Pharmer</title>
<!-- d3 -->
<script src="https://d3js.org/d3.v5.js"></script>
<script src="https://d3js.org/d3-array.v2.min.js"></script>
<script src="https://d3js.org/d3-force.v2.min.js"></script>
<script src="https://d3js.org/d3-force.v2.min.js"></script>
<link href="https://fonts.googleapis.com/css?family=Work+Sans:400,700&display=swap" rel="stylesheet">
<!-- d3 plugins -->
<!-- d3 could -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/d3-cloud/1.2.5/d3.layout.cloud.min.js"
integrity="sha384-bfFsMJ/X+j7+0PU5d5Qaiomm4ZQm+P++8ScVu7xWaeB3FpsIL6YBWfFfRlrNEBBX"
crossorigin="anonymous"></script>
<!-- jquery -->
<script src="https://code.jquery.com/jquery-3.3.1.slim.min.js"
integrity="sha384-q8i/X+965DzO0rT7abK41JStQIAqVgRVzpbzo5smXKp4YfRvH+8abtTE1Pi6jizo"
crossorigin="anonymous"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.min.js" integrity="sha384-vk5WoKIaW/vJyUAd9n/wmopsmNhiy+L2Z+SBxGYnUkunIxVxAv/UtMOhba/xskxh" crossorigin="anonymous"></script>
<!-- jquery ui -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.12.1/jquery-ui.min.js" integrity="sha384-PtTRqvDhycIBU6x1wwIqnbDo8adeWIWP3AHmnrvccafo35E7oIvW7HPXn2YimvWu" crossorigin="anonymous"></script>
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.12.1/jquery-ui.min.css" integrity="sha384-VK/ia2DWrvtO05YDcbWI8WE3WciOH0RhfPNuRJGSa3dpAs5szXWQuCnPNv/yzpO4" crossorigin="anonymous">
<!-- popper -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/popper.js/1.14.7/umd/popper.min.js"
integrity="sha384-UO2eT0CpHqdSJQ6hJty5KVphtPhzWj9WO1clHTMGa3JDZwrnQq4sF86dIHNDz0W1"
crossorigin="anonymous"></script>
<!-- bootstrap -->
<link rel="stylesheet" href="https://stackpath.bootstrapcdn.com/bootstrap/4.3.1/css/bootstrap.min.css"
integrity="sha384-ggOyR0iXCbMQv3Xipma34MD+dH/1fQ784/j6cY/iJTQUOhcWr7x9JvoRxT2MZw1T" crossorigin="anonymous">
<script src="https://stackpath.bootstrapcdn.com/bootstrap/4.3.1/js/bootstrap.min.js"
integrity="sha384-JjSmVgyd0p3pXB1rRibZUAYoIIy6OrQ6VrjIEaFf/nJGzIxFDsf4x0xIM+B07jRM"
crossorigin="anonymous"></script>
<!-- bootstrap plugins -->
<!-- bootstrap-select -->
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/bootstrap-select/1.13.11/css/bootstrap-select.min.css" integrity="sha384-ZSKgyG7f8kFUO6JFSkEehXkQLG18PWWEEDcWLfHBDDszwRRyd/VJVjiBxjMd2I6f" crossorigin="anonymous">
<script src="https://cdnjs.cloudflare.com/ajax/libs/bootstrap-select/1.13.11/js/bootstrap-select.min.js" integrity="sha384-nQu0uOtvUAto18WugU6SfZ+mfZLvqncogj681f5tRMxOBXfFoIbe8YKhqbCIt31R" crossorigin="anonymous"></script>
<!-- pace.js -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/pace.min.js" integrity="sha384-5DyzDgtTHw1bbnR1u2aQPxi5+e1KVPsygV5Pioo5W+5ua3sN5AHF05kzM0QfXXqm" crossorigin="anonymous"></script>
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/green/pace-theme-minimal.min.css" integrity="sha384-4cumayJM6zn3tqKnVp3cQIfYApRXXWXmZjYfLwKUSM6JocCTUSnqU3T8UeRC9msg" crossorigin="anonymous">
<!-- math -->
<!-- ml.js and math.js -->
<script src="https://www.lactame.com/lib/ml/4.0.0/ml.min.js"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/mathjs/6.2.2/math.min.js"></script>
<!-- Script JS -->
<script type="application/javascript" src="js/summary_plot.js"></script>
<script type="application/javascript" src="js/gene_description.js"></script>
<script type="application/javascript" src="js/dr_plot.js"></script>
<script type="application/javascript" src="js/heat_map.js"></script>
<script type="application/javascript" src="js/buttons_and_data.js"></script>
<script type="application/javascript" src="js/script_json.js"></script>
<script type="application/javascript" src="js/alert.js"></script>
<!-- style -->
<link rel="stylesheet" href="styles.css" />
</head>
<body>
<div id="header-wrap" class="text-center">
<header>
<nav class="navbar navbar-expand-lg navbar-light bg-light">
<a class="navbar-brand font-weight-bold" href="#">Utah Transcriptome Pharmer</a>
<button class="navbar-toggler" type="button" data-toggle="collapse" data-target="#navbarSupportedContent" aria-controls="navbarSupportedContent" aria-expanded="false" aria-label="Toggle navigation">
<span class="navbar-toggler-icon"></span>
</button>
<div class="collapse navbar-collapse" id="navbarSupportedContent">
<ul class="navbar-nav mr-auto">
</ul>
<ul class="navbar-nav">
<li class="nav-item">
<a class="nav-link" href="https://youtu.be/Et4tN2wOwj8" target="_blank">DEMO Video</a>
</li>
<li class="nav-item">
<a class="nav-link" href="doc/process book.pdf" target="_blank">Process Book</a>
</li>
<li class="nav-item">
<a class="nav-link" href="https://github.com/printfer/utah_transcriptome_pharmer" target="_blank">About</a>
</li>
</ul>
</div>
</nav>
<!--
<h1 class="display-3 my-3">Utah Transcriptome Pharmer</h1>
<div class="mb-2">
<span>DEMO Video</span>
<span>Process Book</span>
<span></span>
</div>
-->
</header>
</div>
<div class="mb-4">
</div>
<div class="row mx-1">
<div class="col-sm-3 text-center">
<!-- gene description -->
<div id="geneDescription"></div>
</div>
<div class="col">
<div id="appFunctions" class="row text-center justify-content-md-center">
<!-- Buttons -->
<div id="buttons">
<div id="primaryButtons" class="row align-items-center">
<div id="heatmapButtons" class="col">
</div>
<div id="cellButtons" class="col">
</div>
<div id="dataButtons" class="col">
</div>
<div id="clustButtons" class="col">
</div>
</div>
</div>
</div>
</div>
<div class="col-sm-3 text-center">
<!-- Summary Plot -->
<div id="summaryPlot"></div>
</div>
</div>
<!-- Part 1 -->
<div class="row">
<!-- Dimensional Reduction Plot -->
<div id="drPlot" class="col"></div>
<!-- Heatmap/Table -->
<div id="heatmap"></div>
<!-- Dendrogram -->
<div id="dendrogram"></div>
</div>
<!-- Part2 -->
<div class="row">
</div>
</body>
</html>