Merge pull request #62 from postylem/master

Update Dockerfile Julia 1.3.1->1.5.3

Author: bzinberg

Dockerfile

@@ -17,9 +17,18 @@ RUN             git config --global user.email "[email protected]"
 RUN             virtualenv -p /usr/bin/python3 /venv
 RUN             . /venv/bin/activate && pip install jupyter jupytext matplotlib tensorflow torch
 
-RUN             wget https://julialang-s3.julialang.org/bin/linux/x64/1.3/julia-1.3.1-linux-x86_64.tar.gz
-RUN             tar -xzv < julia-1.3.1-linux-x86_64.tar.gz
-RUN             ln -s /julia-1.3.1/bin/julia /usr/bin/julia
+# Specify Julia version. Find current version on https://julialang.org/downloads/
+ARG             JULIA_VERSION_SHORT="1.5"
+ARG             JULIA_VERSION_FULL="${JULIA_VERSION_SHORT}.3"
+ENV             JULIA_INSTALLATION_PATH=/opt/julia
+
+RUN             wget https://julialang-s3.julialang.org/bin/linux/x64/${JULIA_VERSION_SHORT}/julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                tar zxf julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                mkdir -p "${JULIA_INSTALLATION_PATH}" && \
+                mv julia-${JULIA_VERSION_FULL} "${JULIA_INSTALLATION_PATH}/" && \
+                ln -fs "${JULIA_INSTALLATION_PATH}/julia-${JULIA_VERSION_FULL}/bin/julia" /usr/local/bin/ && \
+                rm julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                julia -e 'import Pkg; Pkg.add("IJulia")'
 
 ADD             . /gen-quickstart
 ENV             JULIA_PROJECT=/gen-quickstart

Dockerfile.ubuntu-2004

@@ -4,7 +4,8 @@ MAINTAINER      MIT Probabilistic Computing Project
 # Avoid tzdata configuration dialog
 ENV             DEBIAN_FRONTEND=noninteractive
 
-RUN             apt update -qq && apt install -qq -y \
+RUN             apt-get update -qq && \
+                apt-get install -qq -y \
                     hdf5-tools \
                     git \
                     python3-dev \
@@ -14,23 +15,24 @@ RUN             apt update -qq && apt install -qq -y \
                     zlib1g-dev && \
                 rm -rf /var/lib/apt/lists/*
 
-# Since Tensorflow only supports Python up to 3.7 and not 3.8 (default in 20.04) instead of tensorflow or tf-nightly-cpu we use
-# Tensorflow wheel files from https://pypi.org/project/tf-nightly/2.2.0.dev20200307/#files
-RUN             wget https://files.pythonhosted.org/packages/30/8e/650b282491e126a39e2b256f1ad790d566c53465dfd801a7703e421431e3/tf_nightly-2.2.0.dev20200307-cp38-cp38-manylinux2010_x86_64.whl && \
-                python3 -m pip install --upgrade pip && \
-                python3 -m pip install tf_nightly-2.2.0.dev20200307-cp38-cp38-manylinux2010_x86_64.whl && \
-                rm tf_nightly-2.2.0.dev20200307-cp38-cp38-manylinux2010_x86_64.whl
+RUN             git config --global user.name "Gen User" && \
+                git config --global user.email "[email protected]"
 
-RUN             git config --global user.name "Gen User"
-RUN             git config --global user.email "[email protected]"
+RUN             python3 -m pip install --upgrade pip && \
+                python3 -m pip install jupyter jupytext matplotlib tensorflow torch
 
-# Could use virtual environment - "RUN virtualenv -p /usr/bin/python3 /venv" and ". /venv/bin/activate" && in front of pip and julia commands
-RUN             python3 -m pip install jupyter jupytext matplotlib
+# Specify Julia version. Find current version on https://julialang.org/downloads/
+ARG             JULIA_VERSION_SHORT="1.5"
+ARG             JULIA_VERSION_FULL="${JULIA_VERSION_SHORT}.3"
+ENV             JULIA_INSTALLATION_PATH=/opt/julia
 
-RUN             wget https://julialang-s3.julialang.org/bin/linux/x64/1.3/julia-1.3.1-linux-x86_64.tar.gz && \
-                tar -xzv < julia-1.3.1-linux-x86_64.tar.gz && \
-                ln -s /julia-1.3.1/bin/julia /usr/bin/julia && \
-                rm julia-1.3.1-linux-x86_64.tar.gz
+RUN             wget https://julialang-s3.julialang.org/bin/linux/x64/${JULIA_VERSION_SHORT}/julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                tar zxf julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                mkdir -p "${JULIA_INSTALLATION_PATH}" && \
+                mv julia-${JULIA_VERSION_FULL} "${JULIA_INSTALLATION_PATH}/" && \
+                ln -fs "${JULIA_INSTALLATION_PATH}/julia-${JULIA_VERSION_FULL}/bin/julia" /usr/local/bin/ && \
+                rm julia-${JULIA_VERSION_FULL}-linux-x86_64.tar.gz && \
+                julia -e 'import Pkg; Pkg.add("IJulia")'
 
 ADD             . /gen-quickstart
 ENV             JULIA_PROJECT=/gen-quickstart