Try to track down tree segfault

Author: kbattocchi

azure-pipelines.yml

@@ -50,190 +50,21 @@ jobs:
     name: output
     displayName: 'Determine type of code change'
 
-- template: azure-pipelines-steps.yml
-  parameters:
-    versions: ['3.6']
-    images: ['ubuntu-18.04']
-    package: '-e .[all]'
-    job:
-      job: 'Docs'
-      displayName: 'Build documentation'  
-      dependsOn: 'EvalChanges'
-      condition: eq(dependencies.EvalChanges.outputs['output.buildDocs'], 'True')
-      steps:
-      - script: 'sudo apt-get -yq install graphviz'
-        displayName: 'Install graphviz'
-
-      - script: 'pip install sklearn-contrib-lightning'
-        displayName: 'Install lightning'        
-
-      - script: 'pip install git+https://github.com/slundberg/shap.git@d1d2700acc0259f211934373826d5ff71ad514de'
-        displayName: 'Install specific version of shap'  
-
-      - script: 'pip install "sphinx < 3.2" sphinx_rtd_theme'
-        displayName: 'Install sphinx'
-
-      - script: 'python setup.py build_sphinx -W'
-        displayName: 'Build documentation'
-
-      - publish: 'build/sphinx/html'
-        artifact: 'Documentation'
-        displayName: 'Publish documentation as artifact'
-
-      - script: 'python setup.py build_sphinx -b doctest'
-        displayName: 'Run doctests'
-
-- template: azure-pipelines-steps.yml
-  parameters:
-    versions: ['3.8']
-    images: ['ubuntu-18.04']
-    package: '-e .[tf,plt]'
-    job:
-      job: 'Notebooks'
-      dependsOn: 'EvalChanges'
-      condition: eq(dependencies.EvalChanges.outputs['output.buildNbs'], 'True')
-      steps:
-      # Work around https://github.com/pypa/pip/issues/9542
-      - script: 'pip install -U numpy'
-        displayName: 'Upgrade numpy'
-
-      - script: 'pip install pytest-runner && python setup.py pytest'
-        displayName: 'Unit tests'
-        env:
-          PYTEST_ADDOPTS: '-m "notebook"'
-
-      - task: PublishTestResults@2
-        displayName: 'Publish Test Results **/test-results.xml'
-        inputs:
-          testResultsFiles: '**/test-results.xml'
-          testRunTitle: 'Notebooks'
-        condition: succeededOrFailed()
-
-# - job: 'AutoML'
-#   dependsOn: 'EvalChanges'
-#   condition: eq(dependencies.EvalChanges.outputs['output.testCode'], 'True')
-#   variables:
-#     python.version: '3.6'
-#   pool:
-#     vmImage: 'ubuntu-18.04'
-#   steps:
-#   - template: azure-pipelines-steps.yml
-#     parameters:
-#       body:
-#         - task: AzureCLI@2
-#           displayName: 'AutoML tests'
-#           inputs:
-#             azureSubscription: 'automl'
-#             scriptLocation: 'inlineScript'
-#             scriptType: 'pscore'
-#             powerShellIgnoreLASTEXITCODE: '' # string for now due to https://github.com/microsoft/azure-pipelines-tasks/issues/12266
-#             inlineScript: |
-#               $env:SUBSCRIPTION_ID = az account show --query id -o tsv
-#               python setup.py pytest
-#           env:
-#             WORKSPACE_NAME: 'testWorkspace'
-#             RESOURCE_GROUP: 'testingAutoMLEconML'
-#             PYTEST_ADDOPTS: '-m "automl" -n 0'
-#             COVERAGE_PROCESS_START: 'setup.cfg'
-
-#         - task: PublishTestResults@2
-#           displayName: 'Publish Test Results **/test-results.xml'
-#           inputs:
-#             testResultsFiles: '**/test-results.xml'
-#             testRunTitle: 'AutoML'
-#           condition: succeededOrFailed()
-#       package: '.[automl]'
-
-- template: azure-pipelines-steps.yml
-  parameters:
-    versions: ['3.8']
-    images: ['macOS-10.15']
-    job:
-      job: 'Linting'
-      dependsOn: 'EvalChanges'
-      condition: eq(dependencies.EvalChanges.outputs['output.testCode'], 'True')
-      steps:
-      - script: 'pip install pycodestyle && pycodestyle econml'
-        failOnStderr: true
-        displayName: Linting
-
 - template: azure-pipelines-steps.yml
   parameters:
     package: '-e .[tf,plt]'
+    images: ['macOS-10.14','macOS-10.15']
     job:
       job: Tests_main
       dependsOn: 'EvalChanges'
       condition: eq(dependencies.EvalChanges.outputs['output.testCode'], 'True')
       displayName: 'Run tests (main)'
       steps:
+      - script: 'pip install psutil && python -c "import psutil; print(psutil.virtual_memory())"'
+        displayName: 'Memory diagnostic'
       - script: 'pip install pytest-runner && python setup.py pytest'
         displayName: 'Unit tests'
         env:
+          PYTHONMALLOC: debug
+          PYTHONFAULTHANDLER: 1          
           PYTEST_ADDOPTS: '-m "not (notebook or automl or dml or causal)" -n 2'
-          COVERAGE_PROCESS_START: 'setup.cfg'
-      - task: PublishTestResults@2
-        displayName: 'Publish Test Results **/test-results.xml'
-        inputs:
-          testResultsFiles: '**/test-results.xml'
-          testRunTitle: 'Python $(python.version), image $(imageName)'
-        condition: succeededOrFailed()
-
-      - task: PublishCodeCoverageResults@1
-        displayName: 'Publish Code Coverage Results'
-        inputs:
-          codeCoverageTool: Cobertura
-          summaryFileLocation: '$(System.DefaultWorkingDirectory)/**/coverage.xml'
-
-- template: azure-pipelines-steps.yml
-  parameters:
-    package: '-e .[tf,plt]'
-    job:
-      job: Tests_dml
-      dependsOn: 'EvalChanges'
-      condition: eq(dependencies.EvalChanges.outputs['output.testCode'], 'True')
-      displayName: 'Run tests (DML)'
-      steps:
-      - script: 'pip install pytest-runner && python setup.py pytest'
-        displayName: 'Unit tests'
-        env:
-          PYTEST_ADDOPTS: '-m "dml"'
-          COVERAGE_PROCESS_START: 'setup.cfg'
-      - task: PublishTestResults@2
-        displayName: 'Publish Test Results **/test-results.xml'
-        inputs:
-          testResultsFiles: '**/test-results.xml'
-          testRunTitle: 'Python $(python.version), image $(imageName)'
-        condition: succeededOrFailed()
-
-      - task: PublishCodeCoverageResults@1
-        displayName: 'Publish Code Coverage Results'
-        inputs:
-          codeCoverageTool: Cobertura
-          summaryFileLocation: '$(System.DefaultWorkingDirectory)/**/coverage.xml'
-
-- template: azure-pipelines-steps.yml
-  parameters:
-    package: '-e .[tf,plt]'
-    job:
-      job: Tests_causal
-      dependsOn: 'EvalChanges'
-      condition: eq(dependencies.EvalChanges.outputs['output.testCode'], 'True')
-      displayName: 'Run tests (Causal)'
-      steps:
-      - script: 'pip install pytest-runner && python setup.py pytest'
-        displayName: 'Unit tests'
-        env:
-          PYTEST_ADDOPTS: '-m "causal" -n 1'
-          COVERAGE_PROCESS_START: 'setup.cfg'
-      - task: PublishTestResults@2
-        displayName: 'Publish Test Results **/test-results.xml'
-        inputs:
-          testResultsFiles: '**/test-results.xml'
-          testRunTitle: 'Python $(python.version), image $(imageName)'
-        condition: succeededOrFailed()
-
-      - task: PublishCodeCoverageResults@1
-        displayName: 'Publish Code Coverage Results'
-        inputs:
-          codeCoverageTool: Cobertura
-          summaryFileLocation: '$(System.DefaultWorkingDirectory)/**/coverage.xml'