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Move defaults to proper place
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.github/workflows/ci.yml

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@@ -9,13 +9,6 @@ on:
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tags:
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- "*"
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defaults:
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run:
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# This is needed for miniconda, see:
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# https://github.com/marketplace/actions/setup-miniconda#important.
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shell: bash -l {0}
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jobs:
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lint:
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runs-on: ubuntu-20.04
@@ -98,9 +91,16 @@ jobs:
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- name: Upload coverage report
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uses: codecov/codecov-action@v1
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# Test if the python-isal conda package can be build. Which is linked
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# dynamically to the conda isa-l package.
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test-dynamic:
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runs-on: ${{ matrix.os }}
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needs: lint
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defaults:
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run:
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# This is needed for miniconda, see:
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# https://github.com/marketplace/actions/setup-miniconda#important.
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shell: bash -l {0}
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strategy:
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matrix:
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os: ["ubuntu-latest", "macos-latest", "windows-latest"]
@@ -113,7 +113,7 @@ jobs:
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with:
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channels: conda-forge,bioconda,defaults
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- name: Install requirements (universal)
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run: conda install nasm isa-l python tox
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run: conda install isa-l python tox
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- name: Install requirements (unix)
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run: conda install make automake autoconf libtool
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if: runner.os != 'Windows'

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