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Jawad Chowdhury
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test code for different fitting function
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BGlib/misc/jc1_bg_gui_basic.ipynb

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Original file line numberDiff line numberDiff line change
@@ -1208,31 +1208,6 @@
12081208
" ax.plot(vdc, loop_fit_function(vdc, *init_guess_coef_vec))\n",
12091209
" except Exception as e:\n",
12101210
" print('Error: ', e) \n",
1211-
" ## \n",
1212-
" from sklearn.metrics import r2_score\n",
1213-
" best_guess = init_guess_coef_vec.copy()\n",
1214-
" try:\n",
1215-
" best_guess, _ = curve_fit(loop_fit_function, vdc, pr_vec, p0=init_guess_coef_vec, maxfev=5000)\n",
1216-
" best_pred = loop_fit_function(vdc, *best_guess)\n",
1217-
" best_err = np.sum((pr_vec - best_pred) ** 2)\n",
1218-
" best_r2 = r2_score(pr_vec, best_pred)\n",
1219-
" except RuntimeError:\n",
1220-
" best_err = np.inf\n",
1221-
" best_r2 = -np.inf\n",
1222-
" \n",
1223-
" for trial_no in range(1000):\n",
1224-
" if best_r2 >= 0.95:\n",
1225-
" break \n",
1226-
" p0_rand = init_guess_coef_vec * (1 + 0.3 * np.random.randn(len(init_guess_coef_vec)))\n",
1227-
" try:\n",
1228-
" guess, _ = curve_fit(loop_fit_function, vdc, pr_vec, p0=p0_rand, maxfev=5000)\n",
1229-
" pred = loop_fit_function(vdc, *guess)\n",
1230-
" err = np.sum((pr_vec - pred) ** 2)\n",
1231-
" r2 = r2_score(pr_vec, pred)\n",
1232-
" if err < best_err:\n",
1233-
" best_guess, best_err, best_r2 = guess, err, r2\n",
1234-
" except RuntimeError:\n",
1235-
" continue\n",
12361211
" ##\n",
12371212
" X = []\n",
12381213
" y = [] \n",

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