Adding SkipGNN to PyGeo for better exploitation of protein-protein interaction networks #2689
THinnerichs
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Thanks for the pointer. We can definitely try to add it to the library. Please feel free to make a first draft on this one and reach out to me in case you have any questions. |
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Hey Matthias,
I just wanted to request the addition of SkipGNN (https://www.nature.com/articles/s41598-020-77766-9) to the library. As published in Nature, I think it would be a great addition to PyGeo, as PPI networks make a substantial amount of of the use cases for bioinformatics (e.g. https://github.com/a-r-j/graphein).
The paper is well founded and quite good description of their methods and formulas. If needed I can try an implementation myself.
Best wishes,
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