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I am using PyG for link prediction on a heterogeneous graph based on this example.
Using RandomLinkSplit(), edges can be separated into the train, validation, and test. This cross-validation method, However, only allows predicting edges whose nodes have already been seen by the training algorithm. In my case, specifically, for personalized medicine applications, I need to test my model for predicting edges for new nodes (let's consider them as new patients that were not available during the training phase). I wonder whether there is a specific way in PyG to handle such problems?
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I am using PyG for link prediction on a heterogeneous graph based on this example.
Using
RandomLinkSplit()
, edges can be separated into the train, validation, and test. This cross-validation method, However, only allows predicting edges whose nodes have already been seen by the training algorithm. In my case, specifically, for personalized medicine applications, I need to test my model for predicting edges for new nodes (let's consider them as new patients that were not available during the training phase). I wonder whether there is a specific way in PyG to handle such problems?Beta Was this translation helpful? Give feedback.
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