Fix for GP-smoothing

Author: lucianopaz

docs/source/notebooks/GP-smoothing.ipynb

@@ -168,7 +168,7 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "/home/lpaz/anaconda3/lib/python3.6/site-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.\n",
+      "/anaconda3/lib/python3.6/site-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.\n",
       "  from ._conv import register_converters as _register_converters\n"
      ]
     }
@@ -197,15 +197,15 @@
      "output_type": "stream",
      "text": [
       "INFO (theano.gof.compilelock): Waiting for existing lock by process '16678' (I am process '16664')\n",
-      "INFO (theano.gof.compilelock): To manually release the lock, delete /home/lpaz/.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
+      "INFO (theano.gof.compilelock): To manually release the lock, delete /.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
       "INFO (theano.gof.compilelock): Waiting for existing lock by process '16678' (I am process '16664')\n",
-      "INFO (theano.gof.compilelock): To manually release the lock, delete /home/lpaz/.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
+      "INFO (theano.gof.compilelock): To manually release the lock, delete /.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
       "INFO (theano.gof.compilelock): Waiting for existing lock by process '16678' (I am process '16664')\n",
-      "INFO (theano.gof.compilelock): To manually release the lock, delete /home/lpaz/.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
+      "INFO (theano.gof.compilelock): To manually release the lock, delete /.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
       "INFO (theano.gof.compilelock): Waiting for existing lock by process '16678' (I am process '16664')\n",
-      "INFO (theano.gof.compilelock): To manually release the lock, delete /home/lpaz/.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
+      "INFO (theano.gof.compilelock): To manually release the lock, delete /.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n",
       "INFO (theano.gof.compilelock): Waiting for existing lock by process '16678' (I am process '16664')\n",
-      "INFO (theano.gof.compilelock): To manually release the lock, delete /home/lpaz/.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n"
+      "INFO (theano.gof.compilelock): To manually release the lock, delete /.theano/compiledir_Linux-4.15--generic-x86_64-with-debian-buster-sid-x86_64-3.6.8-64/lock_dir\n"
      ]
     }
    ],
@@ -267,9 +267,9 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
       "  warnings.warn('find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.')\n",
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
       "  warnings.warn('In future versions, set the optimization algorithm with a string. '\n",
       "logp = -4.6549e+06:   0%|          | 16/5000 [00:01<07:29, 11.10it/s]  \n"
      ]
@@ -316,9 +316,9 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
       "  warnings.warn('find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.')\n",
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
       "  warnings.warn('In future versions, set the optimization algorithm with a string. '\n",
       "logp = -5.2675e+06:   1%|          | 37/5000 [00:00<00:06, 741.11it/s] \n"
      ]
@@ -363,9 +363,9 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:61: UserWarning: find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.\n",
       "  warnings.warn('find_MAP should not be used to initialize the NUTS sampler, simply call pymc3.sample() and it will automatically initialize NUTS in a better way.')\n",
-      "/home/lpaz/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
+      "/repos/pymc3/pymc3/tuning/starting.py:102: UserWarning: In future versions, set the optimization algorithm with a string. For example, use `method=\"L-BFGS-B\"` instead of `fmin=sp.optimize.fmin_l_bfgs_b\"`.\n",
       "  warnings.warn('In future versions, set the optimization algorithm with a string. '\n",
       "logp = -6.6522e+06:   1%|          | 52/5000 [00:00<00:04, 1058.44it/s]\n",
       "logp = -1.3071e+07:   2%|▏         | 108/5000 [00:00<00:05, 835.78it/s] \n",