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1 | 1 | # Release Notes
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2 | 2 |
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| 3 | +## PyMC3 3.2 (October 2, 2017) |
| 4 | + |
| 5 | +### New features |
| 6 | + |
| 7 | +This version includes two major contributions from our Google Summer of Code 2017 students: |
| 8 | + |
| 9 | +* Maxim Kucherov extended and refactored the variational inference module. This primarily adds two important classes, representing operator variational inference (`OPVI`) objects and `Approximation` objects. These make it easier to extend existing `variational` classes, and to derive inference from `variational` optimizations, respectively. The `variational` module now also includes normalizing flows (`NFVI`). |
| 10 | +* Bill Engels added an extensive new Gaussian processes (`gp`) module. Standard GPs can be specified using either `Latent` or `Marginal` classes, depending on the nature of the underlying function. A Student-T process `TP` has been added. In order to accomodate larger datasets, approximate marginal Gaussian processes (`MarginalSparse`) have been added. |
| 11 | + |
| 12 | +Documentation has been improved as the result of the project's monthly "docathons". |
| 13 | + |
| 14 | +An experimental stochastic gradient Fisher scoring (`SGFS`) sampling step method has been added. |
| 15 | + |
| 16 | +The API for `find_MAP` was enhanced. |
| 17 | + |
| 18 | +SMC now estimates the marginal likelihood. |
| 19 | + |
| 20 | +Added `Logistic` and `HalfFlat` distributions to set of continuous distributions. |
| 21 | + |
| 22 | +Bayesian fraction of missing information (`bfmi`) function added to `stats`. |
| 23 | + |
| 24 | +Enhancements to `compareplot` added. |
| 25 | + |
| 26 | +QuadPotential adaptation has been implemented. |
| 27 | + |
| 28 | +Script added to build and deploy documentation. |
| 29 | + |
| 30 | +MAP estimates now available for transformed and non-transformed variables. |
| 31 | + |
| 32 | +The `Constant` variable class has been deprecated, and will be removed in 3.3. |
| 33 | + |
| 34 | +DIC and BPIC calculations have been sped up. |
| 35 | + |
| 36 | +Arrays are now accepted as arguments for the `Bound` class. |
| 37 | + |
| 38 | +`random` method was added to the `Wishart` and `LKJCorr` distributions. |
| 39 | + |
| 40 | +Progress bars have been added to LOO and WAIC calculations. |
| 41 | + |
| 42 | +All example notebooks updated to reflect changes in API since 3.1. |
| 43 | + |
| 44 | +Parts of the test suite have been refactored. |
| 45 | + |
| 46 | +### Fixes |
| 47 | + |
| 48 | +Matplotlib is no longer a hard dependency, making it easier to use in settings where installing Matplotlib is problematic. PyMC will only complain if plotting is attempted. |
| 49 | + |
| 50 | +Several bugs in the Gaussian process covariance were fixed. |
| 51 | + |
| 52 | +All chains are now used to calculate WAIC and LOO. |
| 53 | + |
| 54 | +AR(1) log-likelihood function has been fixed. |
| 55 | + |
| 56 | +Slice sampler fixed to sample from 1D conditionals. |
| 57 | + |
| 58 | +Several docstring fixes. |
| 59 | + |
3 | 60 | ## PyMC3 3.1 (June 23, 2017)
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4 | 61 |
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5 | 62 | ### New features
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