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installationissues about dependencies or installationissues about dependencies or installationmacOSmacOS relatedmacOS related
Description
Describe the issue:
Mac M1
OS: Ventura 13.4
Issue 1
When using conda create -c conda-forge -n pymc_env "pymc>=4", it installed v4.x instead of v5.x
Issue 2: BLAS
So installed using:
conda create -c conda-forge -n pymc_env "pymc>=5"
conda activate pymc_env
conda install jupyterlab
conda install notebook
conda listwith imports
import arviz as az
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import pymc as pm
import xarray as xrWARNING (pytensor.tensor.blas): Using NumPy C-API based implementation for BLAS functions.
package list
(base) reshamas@Reshamas-MacBook-Pro-2 ~ % conda activate pymc_env
(pymc_env) reshamas@Reshamas-MacBook-Pro-2 ~ % conda list
# packages in environment at /Users/reshamas/opt/anaconda3/envs/pymc_env:
#
# Name Version Build Channel
anyio 3.7.0 pyhd8ed1ab_1 conda-forge
appnope 0.1.3 pyhd8ed1ab_0 conda-forge
argon2-cffi 21.3.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py311he2be06e_3 conda-forge
arviz 0.15.1 pyhd8ed1ab_0 conda-forge
asttokens 2.2.1 pyhd8ed1ab_0 conda-forge
async-lru 2.0.2 pyhd8ed1ab_0 conda-forge
atk-1.0 2.38.0 hcb7b3dd_1 conda-forge
attrs 23.1.0 pyh71513ae_1 conda-forge
babel 2.12.1 pyhd8ed1ab_1 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 pyhd8ed1ab_3 conda-forge
backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge
beautifulsoup4 4.12.2 pyha770c72_0 conda-forge
blas 2.116 openblas conda-forge
blas-devel 3.9.0 16_osxarm64_openblas conda-forge
bleach 6.0.0 pyhd8ed1ab_0 conda-forge
brotli 1.0.9 h1a8c8d9_8 conda-forge
brotli-bin 1.0.9 h1a8c8d9_8 conda-forge
bzip2 1.0.8 h3422bc3_4 conda-forge
c-ares 1.19.1 hb547adb_0 conda-forge
c-compiler 1.5.2 h5008568_0 conda-forge
ca-certificates 2023.5.7 hf0a4a13_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.3.0 pyhd8ed1ab_0 conda-forge
cairo 1.16.0 h1e71087_1016 conda-forge
cctools 973.0.1 hcbb26d4_13 conda-forge
cctools_osx-arm64 973.0.1 hef52d2f_13 conda-forge
certifi 2023.5.7 pyhd8ed1ab_0 conda-forge
cffi 1.15.1 py311hae827db_3 conda-forge
charset-normalizer 3.1.0 pyhd8ed1ab_0 conda-forge
clang 14.0.6 hce30654_1 conda-forge
clang-14 14.0.6 default_h5dc8d65_1 conda-forge
clang_osx-arm64 14.0.6 h15773ab_6 conda-forge
clangxx 14.0.6 default_h610c423_1 conda-forge
clangxx_osx-arm64 14.0.6 he29aa18_6 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
comm 0.1.3 pyhd8ed1ab_0 conda-forge
compiler-rt 14.0.6 h30b49de_0 conda-forge
compiler-rt_osx-arm64 14.0.6 h48302dc_0 conda-forge
cons 0.4.5 pyhd8ed1ab_0 conda-forge
contourpy 1.0.7 py311hd6ee22a_0 conda-forge
cxx-compiler 1.5.2 hffc8910_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
debugpy 1.6.7 py311ha397e9f_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
etuples 0.3.9 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.1.1 pyhd8ed1ab_0 conda-forge
executing 1.2.0 pyhd8ed1ab_0 conda-forge
expat 2.5.0 hb7217d7_1 conda-forge
fastprogress 1.0.3 pyhd8ed1ab_0 conda-forge
filelock 3.12.0 pyhd8ed1ab_0 conda-forge
flit-core 3.9.0 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.14.2 h82840c6_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.39.4 py311heffc1b2_0 conda-forge
freetype 2.12.1 hd633e50_1 conda-forge
fribidi 1.0.10 h27ca646_0 conda-forge
gdk-pixbuf 2.42.10 h1ac0d0d_2 conda-forge
gettext 0.21.1 h0186832_0 conda-forge
giflib 5.2.1 h1a8c8d9_3 conda-forge
graphite2 1.3.13 h9f76cd9_1001 conda-forge
graphviz 8.0.5 h10878c0_0 conda-forge
gtk2 2.24.33 h57013de_2 conda-forge
gts 0.7.6 h4b6d4d6_2 conda-forge
h5netcdf 1.1.0 pyhd8ed1ab_1 conda-forge
h5py 3.8.0 nompi_py311ha096f4f_101 conda-forge
harfbuzz 7.3.0 h46e5fef_0 conda-forge
hdf5 1.14.0 nompi_h6b85c65_103 conda-forge
icu 72.1 he12128b_0 conda-forge
idna 3.4 pyhd8ed1ab_0 conda-forge
importlib-metadata 6.6.0 pyha770c72_0 conda-forge
importlib_metadata 6.6.0 hd8ed1ab_0 conda-forge
importlib_resources 5.12.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.23.1 pyh736e0ef_0 conda-forge
ipython 8.13.2 pyhd1c38e8_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
jedi 0.18.2 pyhd8ed1ab_0 conda-forge
jinja2 3.1.2 pyhd8ed1ab_1 conda-forge
json5 0.9.5 pyh9f0ad1d_0 conda-forge
jsonschema 4.17.3 pyhd8ed1ab_0 conda-forge
jupyter-lsp 2.2.0 pyhd8ed1ab_0 conda-forge
jupyter_client 8.2.0 pyhd8ed1ab_0 conda-forge
jupyter_core 5.3.0 py311h267d04e_0 conda-forge
jupyter_events 0.6.3 pyhd8ed1ab_0 conda-forge
jupyter_server 2.6.0 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.4.4 pyhd8ed1ab_1 conda-forge
jupyterlab 4.0.1 pyhd8ed1ab_0 conda-forge
jupyterlab_pygments 0.2.2 pyhd8ed1ab_0 conda-forge
jupyterlab_server 2.22.1 pyhd8ed1ab_0 conda-forge
kiwisolver 1.4.4 py311hd6ee22a_1 conda-forge
krb5 1.20.1 h69eda48_0 conda-forge
lcms2 2.15 hd835a16_1 conda-forge
ld64 609 h619f069_13 conda-forge
ld64_osx-arm64 609 h7167370_13 conda-forge
lerc 4.0.0 h9a09cb3_0 conda-forge
libaec 1.0.6 hb7217d7_1 conda-forge
libblas 3.9.0 16_osxarm64_openblas conda-forge
libbrotlicommon 1.0.9 h1a8c8d9_8 conda-forge
libbrotlidec 1.0.9 h1a8c8d9_8 conda-forge
libbrotlienc 1.0.9 h1a8c8d9_8 conda-forge
libcblas 3.9.0 16_osxarm64_openblas conda-forge
libclang-cpp14 14.0.6 default_h5dc8d65_1 conda-forge
libcurl 8.1.2 h912dcd9_0 conda-forge
libcxx 16.0.4 h4653b0c_0 conda-forge
libdeflate 1.18 h1a8c8d9_0 conda-forge
libedit 3.1.20191231 hc8eb9b7_2 conda-forge
libev 4.33 h642e427_1 conda-forge
libexpat 2.5.0 hb7217d7_1 conda-forge
libffi 3.4.2 h3422bc3_5 conda-forge
libgd 2.3.3 h939342b_6 conda-forge
libgfortran 5.0.0 12_2_0_hd922786_31 conda-forge
libgfortran5 12.2.0 h0eea778_31 conda-forge
libglib 2.76.3 h24e9cb9_0 conda-forge
libiconv 1.17 he4db4b2_0 conda-forge
libjpeg-turbo 2.1.5.1 h1a8c8d9_0 conda-forge
liblapack 3.9.0 16_osxarm64_openblas conda-forge
liblapacke 3.9.0 16_osxarm64_openblas conda-forge
libllvm14 14.0.6 hd1a9a77_2 conda-forge
libnghttp2 1.52.0 hae82a92_0 conda-forge
libopenblas 0.3.21 openmp_hc731615_3 conda-forge
libpng 1.6.39 h76d750c_0 conda-forge
librsvg 2.56.1 h0db3404_0 conda-forge
libsodium 1.0.18 h27ca646_1 conda-forge
libsqlite 3.42.0 hb31c410_0 conda-forge
libssh2 1.10.0 h7a5bd25_3 conda-forge
libtiff 4.5.0 h4f7d55c_6 conda-forge
libtool 2.4.7 hb7217d7_0 conda-forge
libwebp 1.3.0 h66d6964_0 conda-forge
libwebp-base 1.3.0 h1a8c8d9_0 conda-forge
libxcb 1.15 hf346824_0 conda-forge
libxml2 2.11.4 he3bdae6_0 conda-forge
libzlib 1.2.13 h03a7124_4 conda-forge
llvm-openmp 16.0.4 h1c12783_0 conda-forge
llvm-tools 14.0.6 hd1a9a77_2 conda-forge
logical-unification 0.4.6 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.2 py311he2be06e_0 conda-forge
matplotlib-base 3.7.1 py311h99a5f44_0 conda-forge
matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge
minikanren 1.0.3 pyhd8ed1ab_0 conda-forge
mistune 2.0.5 pyhd8ed1ab_0 conda-forge
multipledispatch 0.6.0 py_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
nbclassic 1.0.0 pyh8b2e9e2_0 conda-forge
nbclient 0.8.0 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.4.0 pyhd8ed1ab_0 conda-forge
nbformat 5.9.0 pyhd8ed1ab_0 conda-forge
ncurses 6.3 h07bb92c_1 conda-forge
nest-asyncio 1.5.6 pyhd8ed1ab_0 conda-forge
notebook 6.5.4 pyha770c72_0 conda-forge
notebook-shim 0.2.3 pyhd8ed1ab_0 conda-forge
numpy 1.24.3 py311hb8f3215_0 conda-forge
openblas 0.3.21 openmp_hf78f355_3 conda-forge
openjpeg 2.5.0 hbc2ba62_2 conda-forge
openssl 3.1.1 h53f4e23_1 conda-forge
overrides 7.3.1 pyhd8ed1ab_0 conda-forge
packaging 23.1 pyhd8ed1ab_0 conda-forge
pandas 2.0.2 py311h9e438b8_0 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
pango 1.50.14 h9f7e0c6_1 conda-forge
parso 0.8.3 pyhd8ed1ab_0 conda-forge
pcre2 10.40 hb34f9b4_0 conda-forge
pexpect 4.8.0 pyh1a96a4e_2 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 9.5.0 py311h095fde6_1 conda-forge
pip 23.1.2 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h27ca646_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_0 conda-forge
platformdirs 3.5.1 pyhd8ed1ab_0 conda-forge
pooch 1.7.0 pyha770c72_3 conda-forge
prometheus_client 0.17.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.38 pyha770c72_0 conda-forge
prompt_toolkit 3.0.38 hd8ed1ab_0 conda-forge
psutil 5.9.5 py311he2be06e_0 conda-forge
pthread-stubs 0.4 h27ca646_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pygments 2.15.1 pyhd8ed1ab_0 conda-forge
pymc 5.3.0 hd8ed1ab_0 conda-forge
pymc-base 5.3.0 pyhd8ed1ab_0 conda-forge
pyobjc-core 9.1.1 py311h490943d_0 conda-forge
pyobjc-framework-cocoa 9.1.1 py311h490943d_0 conda-forge
pyparsing 3.0.9 pyhd8ed1ab_0 conda-forge
pyrsistent 0.19.3 py311he2be06e_0 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
pytensor 2.11.1 py311h7cb1554_0 conda-forge
pytensor-base 2.11.1 py311ha397e9f_0 conda-forge
python 3.11.3 h1456518_0_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-fastjsonschema 2.17.1 pyhd8ed1ab_0 conda-forge
python-graphviz 0.20.1 pyh22cad53_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-tzdata 2023.3 pyhd8ed1ab_0 conda-forge
python_abi 3.11 3_cp311 conda-forge
pytz 2023.3 pyhd8ed1ab_0 conda-forge
pyyaml 6.0 py311he2be06e_5 conda-forge
pyzmq 25.1.0 py311hb1af645_0 conda-forge
readline 8.2 h92ec313_1 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
scipy 1.10.1 py311h93d07a4_3 conda-forge
send2trash 1.8.2 pyhd1c38e8_0 conda-forge
setuptools 67.7.2 pyhd8ed1ab_0 conda-forge
sigtool 0.1.3 h44b9a77_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
sniffio 1.3.0 pyhd8ed1ab_0 conda-forge
soupsieve 2.3.2.post1 pyhd8ed1ab_0 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
tapi 1100.0.11 he4954df_0 conda-forge
terminado 0.17.1 pyhd1c38e8_0 conda-forge
tinycss2 1.2.1 pyhd8ed1ab_0 conda-forge
tk 8.6.12 he1e0b03_0 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
toolz 0.12.0 pyhd8ed1ab_0 conda-forge
tornado 6.3.2 py311heffc1b2_0 conda-forge
traitlets 5.9.0 pyhd8ed1ab_0 conda-forge
typing-extensions 4.6.2 hd8ed1ab_0 conda-forge
typing_extensions 4.6.2 pyha770c72_0 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_0 conda-forge
tzdata 2023c h71feb2d_0 conda-forge
urllib3 2.0.2 pyhd8ed1ab_0 conda-forge
watermark 2.3.1 pyhd8ed1ab_1 conda-forge
wcwidth 0.2.6 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 py_1 conda-forge
websocket-client 1.5.2 pyhd8ed1ab_0 conda-forge
wheel 0.40.0 pyhd8ed1ab_0 conda-forge
xarray 2023.5.0 pyhd8ed1ab_0 conda-forge
xarray-einstats 0.5.1 pyhd8ed1ab_0 conda-forge
xorg-libxau 1.0.11 hb547adb_0 conda-forge
xorg-libxdmcp 1.1.3 h27ca646_0 conda-forge
xz 5.2.6 h57fd34a_0 conda-forge
yaml 0.2.5 h3422bc3_2 conda-forge
zeromq 4.3.4 hbdafb3b_1 conda-forge
zipp 3.15.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h03a7124_4 conda-forge
zstd 1.5.2 hf913c23_6 conda-forge
(pymc_env) reshamas@Reshamas-MacBook-Pro-2 ~ % Reproduceable code example:
xxxError message:
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PyMC version information:
xxx
Context for the issue:
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installationissues about dependencies or installationissues about dependencies or installationmacOSmacOS relatedmacOS related