Merge pull request #97 from Ipuch/trc-reading

feat: trc-data-reader on conda

Author: Ipuch

README.md

@@ -7,7 +7,6 @@ And also animate biorbd models from the pyomeca organization.
 
 ```bash
 conda install -c conda-forge pyorerun rerun-sdk=0.27.2
-pip install trc-data-reader # for .trc file support, not available on conda
 conda install opensim-org::opensim   # not a mandatory dependency
 conda install -c conda-forge biobuddy=0.2.0   # not a mandatory dependency
 ```
@@ -63,7 +62,7 @@ animation.rerun()
 ```
 
 ## From source
-```conda install -c conda-forge ezc3d rerun-sdk=0.27.2 trimesh numpy biorbd pyomeca tk imageio imageio-ffmpeg```
+```conda install -c conda-forge ezc3d rerun-sdk=0.27.2 trimesh numpy biorbd pyomeca tk imageio imageio-ffmpeg trc-data-reader```
 
 if you want to use the OpenSim, you also need to install separately:
 ```conda install -c opensim-org::opensim```
@@ -72,9 +71,6 @@ if you want to use the BioBuddy, you also need to install separately:
 ```conda install -c conda-forge biobuddy=0.2.0``` or
 ```pip install biobuddy==0.2.0```
 
-if you want to use the .trc file support, you also need to install separately:
-``` pip install trc-data-reader ```
-
 Then, ensure it is accessible in your Python environment by installing the package:
 
 ``` pip install . ``` or ``` python setup.py install ```

environment.yml

@@ -5,6 +5,7 @@ channels:
 - opensim-org
 dependencies:
 - ezc3d
+- trc-data-reader>=0.4.0
 - rerun-sdk=0.27.2
 - numpy
 - matplotlib

pyorerun/multi_frame_rate_phase_rerun.py

@@ -2,6 +2,7 @@
 
 import numpy as np
 import rerun as rr
+import rerun.blueprint as rrb
 
 from .phase_rerun import PhaseRerun
 
@@ -120,6 +121,16 @@ def rerun(
         if init:
             spawn = not notebook and os.environ.get("PYORERUN_HEADLESS", "0").lower() not in ("1", "true", "yes")
             rr.init(f"{name}_{0}", spawn=spawn)
+            rr.log("/", rr.ViewCoordinates.RIGHT_HAND_Y_UP, static=True)
+            rr.send_blueprint(
+                rrb.Blueprint(
+                    rrb.Spatial3DView(
+                        name="",
+                        origin=f"/",
+                        eye_controls=rrb.archetypes.EyeControls3D(eye_up=[0, 1, 0]),  # Y-axis as up
+                    )
+                )
+            )
 
         for phase_rerun in self.phase_reruns:
             frame = 0

pyorerun/multi_phase_rerun.py

@@ -86,6 +86,17 @@ def all_windows(self) -> list[str]:
     def rerun_by_frame(self, server_name: str = "multi_phase_animation", notebook=False) -> None:
         spawn = not notebook and os.environ.get("PYORERUN_HEADLESS", "0").lower() not in ("1", "true", "yes")
         rr.init(server_name, spawn=spawn)
+        rr.log("/", rr.ViewCoordinates.RIGHT_HAND_Y_UP, static=True)
+        rr.send_blueprint(
+            rrb.Blueprint(
+                rrb.Spatial3DView(
+                    name="",
+                    origin=f"/",
+                    eye_controls=rrb.archetypes.EyeControls3D(eye_up=[0, 1, 0]),  # Y-axis as up
+                )
+            )
+        )
+
         for i, phase in enumerate(self.rerun_biorbd_phases):
             for j, (window, rr_phase) in enumerate(phase.items()):
 
@@ -100,6 +111,17 @@ def rerun_by_frame(self, server_name: str = "multi_phase_animation", notebook=Fa
     def rerun(self, server_name: str = "multi_phase_animation", notebook=False) -> None:
         spawn = not notebook and os.environ.get("PYORERUN_HEADLESS", "0").lower() not in ("1", "true", "yes")
         rr.init(server_name, spawn=spawn)
+        rr.log("/", rr.ViewCoordinates.RIGHT_HAND_Y_UP, static=True)
+        rr.send_blueprint(
+            rrb.Blueprint(
+                rrb.Spatial3DView(
+                    name="",
+                    origin=f"/",
+                    eye_controls=rrb.archetypes.EyeControls3D(eye_up=[0, 1, 0]),  # Y-axis as up
+                )
+            )
+        )
+
         for i, phase in enumerate(self.rerun_biorbd_phases):
             for j, (window, rr_phase) in enumerate(phase.items()):