Cross encoders parallelism (#419)

I8dNLo · joein · web-flow · commit c8b1a18cfc3b · 2024-12-16T21:59:34.000+03:00
* Merge master * rerank_pairs interface + parallelism support * remove test notebook * Removed unused code * New tests for cross encoders and new interface * Importing Self fix. We will need it for mypy support in newer versions * Removed Self typing * Removed non-needed changes from text * Isort + black * wip: start reviewing (#420) Co-authored-by: Dmitrii Ogn <dimitriy_rudenko@mail.ru> * Test fix * Update fastembed/rerank/cross_encoder/text_cross_encoder.py Co-authored-by: George <george.panchuk@qdrant.tech> * Update fastembed/rerank/cross_encoder/text_cross_encoder.py Co-authored-by: George <george.panchuk@qdrant.tech> * Update fastembed/rerank/cross_encoder/text_cross_encoder.py Co-authored-by: George <george.panchuk@qdrant.tech> * Update fastembed/rerank/cross_encoder/text_cross_encoder_base.py Co-authored-by: George <george.panchuk@qdrant.tech> * Test for parallel processing + bugfix of PosixPath passing * Removed non-needed import and added docstring * Typing fix + argument passing * Test parametrization Moved to selected models set to test * Run base test on all models * Typing fix + improvement of input_names check * nit: fix post process, update docstring, update tokenize, remove redundant imports --------- Co-authored-by: George <george.panchuk@qdrant.tech>
diff --git a/fastembed/rerank/cross_encoder/onnx_text_cross_encoder.py b/fastembed/rerank/cross_encoder/onnx_text_cross_encoder.py
@@ -1,11 +1,15 @@
-from typing import Iterable, Any, Sequence, Optional
+from typing import Any, Iterable, Optional, Sequence, Type
 
 from loguru import logger
 
 from fastembed.common import OnnxProvider
-from fastembed.rerank.cross_encoder.onnx_text_model import OnnxCrossEncoderModel
-from fastembed.rerank.cross_encoder.text_cross_encoder_base import TextCrossEncoderBase
+from fastembed.common.onnx_model import OnnxOutputContext
 from fastembed.common.utils import define_cache_dir
+from fastembed.rerank.cross_encoder.onnx_text_model import (
+    OnnxCrossEncoderModel,
+    TextRerankerWorker,
+)
+from fastembed.rerank.cross_encoder.text_cross_encoder_base import TextCrossEncoderBase
 
 supported_onnx_models = [
     {
@@ -91,7 +95,7 @@ def __init__(
         device_ids: Optional[list[int]] = None,
         lazy_load: bool = False,
         device_id: Optional[int] = None,
-        **kwargs,
+        **kwargs: Any,
     ):
         """
         Args:
@@ -138,7 +142,9 @@ def __init__(
         self.model_description = self._get_model_description(model_name)
         self.cache_dir = define_cache_dir(cache_dir)
         self._model_dir = self.download_model(
-            self.model_description, self.cache_dir, local_files_only=self._local_files_only
+            self.model_description,
+            self.cache_dir,
+            local_files_only=self._local_files_only,
         )
 
         if not self.lazy_load:
@@ -159,7 +165,7 @@ def rerank(
         query: str,
         documents: Iterable[str],
         batch_size: int = 64,
-        **kwargs,
+        **kwargs: Any,
     ) -> Iterable[float]:
         """Reranks documents based on their relevance to a given query.
 
@@ -175,3 +181,44 @@ def rerank(
         yield from self._rerank_documents(
             query=query, documents=documents, batch_size=batch_size, **kwargs
         )
+
+    def rerank_pairs(
+        self,
+        pairs: Iterable[tuple[str, str]],
+        batch_size: int = 64,
+        parallel: Optional[int] = None,
+        **kwargs: Any,
+    ) -> Iterable[float]:
+        yield from self._rerank_pairs(
+            model_name=self.model_name,
+            cache_dir=str(self.cache_dir),
+            pairs=pairs,
+            batch_size=batch_size,
+            parallel=parallel,
+            providers=self.providers,
+            cuda=self.cuda,
+            device_ids=self.device_ids,
+            **kwargs,
+        )
+
+    @classmethod
+    def _get_worker_class(cls) -> Type[TextRerankerWorker]:
+        return TextCrossEncoderWorker
+
+    def _post_process_onnx_output(self, output: OnnxOutputContext) -> Iterable[float]:
+        return (float(elem) for elem in output.model_output)
+
+
+class TextCrossEncoderWorker(TextRerankerWorker):
+    def init_embedding(
+        self,
+        model_name: str,
+        cache_dir: str,
+        **kwargs,
+    ) -> OnnxTextCrossEncoder:
+        return OnnxTextCrossEncoder(
+            model_name=model_name,
+            cache_dir=cache_dir,
+            threads=1,
+            **kwargs,
+        )
diff --git a/fastembed/rerank/cross_encoder/onnx_text_model.py b/fastembed/rerank/cross_encoder/onnx_text_model.py
@@ -1,17 +1,29 @@
-from typing import Sequence, Optional, Iterable
+import os
+from multiprocessing import get_all_start_methods
 from pathlib import Path
+from typing import Any, Iterable, Optional, Sequence, Type
 
 import numpy as np
 from tokenizers import Encoding
 
-from fastembed.common.onnx_model import OnnxModel, OnnxProvider, OnnxOutputContext
+from fastembed.common.onnx_model import (
+    EmbeddingWorker,
+    OnnxModel,
+    OnnxOutputContext,
+    OnnxProvider,
+)
 from fastembed.common.preprocessor_utils import load_tokenizer
 from fastembed.common.utils import iter_batch
+from fastembed.parallel_processor import ParallelWorkerPool
 
 
-class OnnxCrossEncoderModel(OnnxModel):
+class OnnxCrossEncoderModel(OnnxModel[float]):
     ONNX_OUTPUT_NAMES: Optional[list[str]] = None
 
+    @classmethod
+    def _get_worker_class(cls) -> Type["TextRerankerWorker"]:
+        raise NotImplementedError("Subclasses must implement this method")
+
     def _load_onnx_model(
         self,
         model_dir: Path,
@@ -31,40 +43,108 @@ def _load_onnx_model(
         )
         self.tokenizer, _ = load_tokenizer(model_dir=model_dir)
 
-    def tokenize(self, query: str, documents: list[str], **kwargs) -> list[Encoding]:
-        return self.tokenizer.encode_batch([(query, doc) for doc in documents])
-
-    def onnx_embed(self, query: str, documents: list[str], **kwargs) -> OnnxOutputContext:
-        tokenized_input = self.tokenize(query, documents, **kwargs)
+    def tokenize(self, pairs: list[tuple[str, str]], **_: Any) -> list[Encoding]:
+        return self.tokenizer.encode_batch(pairs)
 
+    def _build_onnx_input(self, tokenized_input):
+        input_names = {node.name for node in self.model.get_inputs()}
         inputs = {
             "input_ids": np.array([enc.ids for enc in tokenized_input], dtype=np.int64),
-            "attention_mask": np.array(
-                [enc.attention_mask for enc in tokenized_input], dtype=np.int64
-            ),
         }
-        input_names = {node.name for node in self.model.get_inputs()}
         if "token_type_ids" in input_names:
             inputs["token_type_ids"] = np.array(
                 [enc.type_ids for enc in tokenized_input], dtype=np.int64
             )
+        if "attention_mask" in input_names:
+            inputs["attention_mask"] = np.array(
+                [enc.attention_mask for enc in tokenized_input], dtype=np.int64
+            )
+        return inputs
+
+    def onnx_embed(self, query: str, documents: list[str], **kwargs: Any) -> OnnxOutputContext:
+        pairs = [(query, doc) for doc in documents]
+        return self.onnx_embed_pairs(pairs, **kwargs)
 
+    def onnx_embed_pairs(self, pairs: list[tuple[str, str]], **kwargs: Any) -> OnnxOutputContext:
+        tokenized_input = self.tokenize(pairs, **kwargs)
+        inputs = self._build_onnx_input(tokenized_input)
         onnx_input = self._preprocess_onnx_input(inputs, **kwargs)
         outputs = self.model.run(self.ONNX_OUTPUT_NAMES, onnx_input)
-        return OnnxOutputContext(model_output=outputs[0][:, 0].tolist())
+        relevant_output = outputs[0]
+        scores = relevant_output[:, 0]
+        return OnnxOutputContext(model_output=scores)
 
     def _rerank_documents(
-        self, query: str, documents: Iterable[str], batch_size: int, **kwargs
+        self, query: str, documents: Iterable[str], batch_size: int, **kwargs: Any
     ) -> Iterable[float]:
         if not hasattr(self, "model") or self.model is None:
             self.load_onnx_model()
         for batch in iter_batch(documents, batch_size):
-            yield from self.onnx_embed(query, batch, **kwargs).model_output
+            yield from self._post_process_onnx_output(self.onnx_embed(query, batch, **kwargs))
+
+    def _rerank_pairs(
+        self,
+        model_name: str,
+        cache_dir: str,
+        pairs: Iterable[tuple[str, str]],
+        batch_size: int,
+        parallel: Optional[int] = None,
+        providers: Optional[Sequence[OnnxProvider]] = None,
+        cuda: bool = False,
+        device_ids: Optional[list[int]] = None,
+        **kwargs: Any,
+    ) -> Iterable[float]:
+        is_small = False
+
+        if isinstance(pairs, tuple):
+            pairs = [pairs]
+            is_small = True
+
+        if isinstance(pairs, list):
+            if len(pairs) < batch_size:
+                is_small = True
+
+        if parallel is None or is_small:
+            if not hasattr(self, "model") or self.model is None:
+                self.load_onnx_model()
+            for batch in iter_batch(pairs, batch_size):
+                yield from self._post_process_onnx_output(self.onnx_embed_pairs(batch, **kwargs))
+        else:
+            if parallel == 0:
+                parallel = os.cpu_count()
+
+            start_method = "forkserver" if "forkserver" in get_all_start_methods() else "spawn"
+            params = {
+                "model_name": model_name,
+                "cache_dir": cache_dir,
+                "providers": providers,
+                **kwargs,
+            }
+
+            pool = ParallelWorkerPool(
+                num_workers=parallel or 1,
+                worker=self._get_worker_class(),
+                cuda=cuda,
+                device_ids=device_ids,
+                start_method=start_method,
+            )
+            for batch in pool.ordered_map(iter_batch(pairs, batch_size), **params):
+                yield from self._post_process_onnx_output(batch)
+
+    def _post_process_onnx_output(self, output: OnnxOutputContext) -> Iterable[float]:
+        raise NotImplementedError("Subclasses must implement this method")
 
     def _preprocess_onnx_input(
-        self, onnx_input: dict[str, np.ndarray], **kwargs
+        self, onnx_input: dict[str, np.ndarray], **kwargs: Any
     ) -> dict[str, np.ndarray]:
         """
         Preprocess the onnx input.
         """
         return onnx_input
+
+
+class TextRerankerWorker(EmbeddingWorker):
+    def process(self, items: Iterable[tuple[int, Any]]) -> Iterable[tuple[int, Any]]:
+        for idx, batch in items:
+            onnx_output = self.model.onnx_embed_pairs(batch)
+            yield idx, onnx_output
diff --git a/fastembed/rerank/cross_encoder/text_cross_encoder.py b/fastembed/rerank/cross_encoder/text_cross_encoder.py
@@ -1,8 +1,8 @@
 from typing import Any, Iterable, Optional, Sequence, Type
 
-from fastembed.rerank.cross_encoder.text_cross_encoder_base import TextCrossEncoderBase
-from fastembed.rerank.cross_encoder.onnx_text_cross_encoder import OnnxTextCrossEncoder
 from fastembed.common import OnnxProvider
+from fastembed.rerank.cross_encoder.onnx_text_cross_encoder import OnnxTextCrossEncoder
+from fastembed.rerank.cross_encoder.text_cross_encoder_base import TextCrossEncoderBase
 
 
 class TextCrossEncoder(TextCrossEncoderBase):
@@ -47,7 +47,7 @@ def __init__(
         cuda: bool = False,
         device_ids: Optional[list[int]] = None,
         lazy_load: bool = False,
-        **kwargs,
+        **kwargs: Any,
     ):
         super().__init__(model_name, cache_dir, threads, **kwargs)
 
@@ -72,7 +72,7 @@ def __init__(
         )
 
     def rerank(
-        self, query: str, documents: Iterable[str], batch_size: int = 64, **kwargs
+        self, query: str, documents: Iterable[str], batch_size: int = 64, **kwargs: Any
     ) -> Iterable[float]:
         """Rerank a list of documents based on a query.
 
@@ -85,3 +85,36 @@ def rerank(
             Iterable of scores for each document
         """
         yield from self.model.rerank(query, documents, batch_size=batch_size, **kwargs)
+
+    def rerank_pairs(
+        self,
+        pairs: Iterable[tuple[str, str]],
+        batch_size: int = 64,
+        parallel: Optional[int] = None,
+        **kwargs: Any,
+    ) -> Iterable[float]:
+        """
+        Rerank a list of query-document pairs.
+
+        Args:
+            pairs (Iterable[tuple[str, str]]): An iterable of tuples, where each tuple contains a query and a document
+                to be scored together.
+            batch_size (int, optional): The number of query-document pairs to process in a single batch. Defaults to 64.
+            parallel (Optional[int], optional): The number of parallel processes to use for reranking.
+                If None, parallelization is disabled. Defaults to None.
+            **kwargs (Any): Additional arguments to pass to the underlying reranking model.
+
+        Returns:
+            Iterable[float]: An iterable of scores corresponding to each query-document pair in the input.
+            Higher scores indicate a stronger match between the query and the document.
+
+        Example:
+            >>> encoder = TextCrossEncoder("Xenova/ms-marco-MiniLM-L-6-v2")
+            >>> pairs = [("What is AI?", "Artificial intelligence is ..."), ("What is ML?", "Machine learning is ...")]
+            >>> scores = list(encoder.rerank_pairs(pairs))
+            >>> print(list(map(lambda x: round(x, 2), scores)))
+            [-1.24, -10.6]
+        """
+        yield from self.model.rerank_pairs(
+            pairs, batch_size=batch_size, parallel=parallel, **kwargs
+        )
diff --git a/fastembed/rerank/cross_encoder/text_cross_encoder_base.py b/fastembed/rerank/cross_encoder/text_cross_encoder_base.py
@@ -1,4 +1,4 @@
-from typing import Iterable, Optional
+from typing import Any, Iterable, Optional
 
 from fastembed.common.model_management import ModelManagement
 
@@ -23,7 +23,7 @@ def rerank(
         batch_size: int = 64,
         **kwargs,
     ) -> Iterable[float]:
-        """Reranks a list of documents given a query.
+        """Rerank a list of documents given a query.
 
         Args:
             query (str): The query to rerank the documents.
@@ -32,6 +32,27 @@ def rerank(
             **kwargs: Additional keyword argument to pass to the rerank method.
 
         Yields:
-            Iterable[float]: The scores of reranked the documents.
+            Iterable[float]: The scores of the reranked the documents.
+        """
+        raise NotImplementedError("This method should be overridden by subclasses")
+
+    def rerank_pairs(
+        self,
+        pairs: Iterable[tuple[str, str]],
+        batch_size: int = 64,
+        parallel: Optional[int] = None,
+        **kwargs: Any,
+    ) -> Iterable[float]:
+        """Rerank query-document pairs.
+        Args:
+            pairs (Iterable[tuple[str, str]]): Query-document pairs to rerank
+            batch_size (int): The batch size to use for reranking.
+            parallel: parallel:
+                If > 1, data-parallel encoding will be used, recommended for offline encoding of large datasets.
+                If 0, use all available cores.
+                If None, don't use data-parallel processing, use default onnxruntime threading instead.
+            **kwargs: Additional keyword argument to pass to the rerank method.
+        Yields:
+            Iterable[float]: Scores for each individual pair
         """
         raise NotImplementedError("This method should be overridden by subclasses")
diff --git a/tests/test_text_cross_encoder.py b/tests/test_text_cross_encoder.py
