Error while using Computation.qmd tutorial document

[bmillerlab]

Bug description

When running the tutorial there is a problem with purrr after running the chunk:

library(tidyverse)
library(ggplot2)

Error in purrr::map2_lgl():
ℹ In index: 19.
ℹ With name: ragg.
Caused by error in .make_numeric_version():
! invalid non-character version specification 'x' (type: double)
Backtrace:

1. tidyverse::tidyverse_update()
2. tidyverse::tidyverse_deps(recursive, repos)
3. purrr::map2_lgl(cran_version, local_version, >)
4. purrr:::map2_("logical", .x, .y, .f, ..., .progress = .progress)
5. rlang (local) .f(.x[[i]], .y[[i]], ...)
6. base::Ops.numeric_version(.x, .y)
7. base::as.numeric_version(e2)
8. base::numeric_version(x)
9. base::.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)
10. base::stop(msg, domain = NA)
    Error in purrr::map2_lgl(cran_version, local_version, >) :
    ℹ With name: ragg.
    Caused by error in .make_numeric_version():
    ! invalid non-character version specification 'x' (type: double)

Steps to reproduce

No response

Expected behavior

I continued to the actual steps of the tutorial and so far everything seems to work fine. However, I am just learning and your site indicatres I should report anything that shows up that "might be a problem."

Actual behavior

No response

Your environment

IDE: Version 2024.09.1+394 (2024.09.1+394)
Model: MacBook Pro 2023
Chip: Apple M3 Max
MacOS: Sonoma Version 14.6

Quarto check output

Quarto 1.5.57
[✓] Checking versions of quarto binary dependencies...
Pandoc version 3.2.0: OK
Dart Sass version 1.70.0: OK
Deno version 1.41.0: OK
Typst version 0.11.0: OK
[✓] Checking versions of quarto dependencies......OK
[✓] Checking Quarto installation......OK
Version: 1.5.57
Path: /Applications/RStudio.app/Contents/Resources/app/quarto/bin

(|) Checking tools....................

[mcanouil]

Could you share the exact document you have used, please?
Because the document computations.qmd does not have the library you are mentioning in your error message. (https://quarto.org/docs/get-started/computations/rstudio.html)
Note also that the error comes from R, not Quarto CLI, check/update your R packages.
If you execute the code directly in R and this produces the error, then the issue is your setup.

[cscheid]

I'm going to convert this to a Q&A, since from the evidence, it's an R question.

[bmillerlab]

Hi, Since this is apparently an R problem I'm just going to drop the issue. I am actually using the most up to date versions of everything though, since I just updated everything yesterday (R, Rstudio) morning before I did this and also updated all my packages.

I did a little more digging and it seems some other people are having some potentially related purrr issues. Regardless I actually completed the tutorial.

It must have been the data visualization tutorial, since apparently it was not the computations tutorial. I did both yesterday and reported the problem after I was finished.

Thanks,