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The typical workflow for Quarto is to split multiple reports into multiple files.

I suspect you put them in a single file because of shared datasets or intermediate variables. That's a natural thing to do, but in this case, you are probably better served by a workflow that creates the intermediate results in a separate file, and then use (eg) analysis.qmd, project1.qmd, and project2.qmd.

If you're willing to use .ipynb notebooks, you can consider using a notebook to store the intermediate results of your analysis, and then use notebook embeds.

Your use case (where analyses have shared data, computation, and dependencies) is one where I believe Quarto isn't great at yet. We have plans to i…

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@ming-cui
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