ci

Author: brentp

.github/workflows/ci.yml

@@ -11,7 +11,7 @@ jobs:
   build-test:
     runs-on: ubuntu-latest
     env:
-      NIM_VERSION: stable
+      NIM_VERSION: 1.6.10
       HTSLIB_VERSION: 1.22.1
     steps:
       - name: Checkout
@@ -27,9 +27,11 @@ jobs:
 
       - name: Setup Nim
         run: |
+          export CHOOSENIM_CHOOSE_VERSION=$NIM_VERSION
           curl https://nim-lang.org/choosenim/init.sh -sSf > init.sh
           sh init.sh -y
           echo "$HOME/.nimble/bin" >> $GITHUB_PATH
+          export PATH=/home/runner/.nimble/bin:$PATH
 
       - name: Install system build deps
         run: |
@@ -66,9 +68,11 @@ jobs:
         uses: actions/checkout@v4
       - name: Setup Nim
         run: |
+          export CHOOSENIM_CHOOSE_VERSION=$NIM_VERSION
           curl https://nim-lang.org/choosenim/init.sh -sSf > init.sh
           sh init.sh -y
           echo "$HOME/.nimble/bin" >> $GITHUB_PATH
+          export PATH=/home/runner/.nimble/bin:$PATH
       - name: Install system build deps
         run: |
           sudo apt-get update

strling.nimble

@@ -17,7 +17,7 @@ license       = "MIT"
 
 # Dependencies
 
-requires "nim >= 0.18.0", "kmer >= 0.2.2", "hts", "itertools", "argparse >= 0.7.0 & < 1.0", "msgpack4nim", "lapper"
+requires "nim >= 0.18.0", "kmer >= 0.2.2", "hts", "itertools", "argparse >= 0.7.0 & < 1.0", "msgpack4nim >= 0.4.2", "lapper"
 bin = @["strling"]
 
 srcDir = "src"