use_tidy_github_actions()

Author: hadley

.github/workflows/R-CMD-check.yaml

@@ -10,7 +10,9 @@ on:
   pull_request:
     branches: [main, master]
 
-name: R-CMD-check
+name: R-CMD-check.yaml
+
+permissions: read-all
 
 jobs:
   R-CMD-check:
@@ -25,32 +27,25 @@ jobs:
           - {os: macos-latest,   r: 'release'}
 
           - {os: windows-latest, r: 'release'}
-          # Use 3.6 to trigger usage of RTools35
-          - {os: windows-latest, r: '3.6'}
-          # use 4.1 to check with rtools40's older compiler
-          - {os: windows-latest, r: '4.1'}
+          # use 4.0 or 4.1 to check with rtools40's older compiler
+          - {os: windows-latest, r: 'oldrel-4'}
 
-          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
-          - {os: ubuntu-latest,   r: 'release'}
-          - {os: ubuntu-latest,   r: 'oldrel-1'}
-          - {os: ubuntu-latest,   r: 'oldrel-2'}
-          - {os: ubuntu-latest,   r: 'oldrel-3'}
-          - {os: ubuntu-latest,   r: 'oldrel-4'}
+          - {os: ubuntu-latest,  r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,  r: 'release'}
+          - {os: ubuntu-latest,  r: 'oldrel-1'}
+          - {os: ubuntu-latest,  r: 'oldrel-2'}
+          - {os: ubuntu-latest,  r: 'oldrel-3'}
+          - {os: ubuntu-latest,  r: 'oldrel-4'}
 
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
       R_KEEP_PKG_SOURCE: yes
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-pandoc@v2
 
-      # For file snapshot that uses png
-      - name: Install xquartz
-        if: runner.os == 'macOS'
-        run: brew install --cask xquartz
-
       - uses: r-lib/actions/setup-r@v2
         with:
           r-version: ${{ matrix.config.r }}
@@ -65,3 +60,4 @@ jobs:
       - uses: r-lib/actions/check-r-package@v2
         with:
           upload-snapshots: true
+          build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'

.github/workflows/pkgdown.yaml

@@ -9,7 +9,9 @@ on:
     types: [published]
   workflow_dispatch:
 
-name: pkgdown
+name: pkgdown.yaml
+
+permissions: read-all
 
 jobs:
   pkgdown:
@@ -19,8 +21,10 @@ jobs:
       group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-pandoc@v2
 
@@ -39,7 +43,7 @@ jobs:
 
       - name: Deploy to GitHub pages 🚀
         if: github.event_name != 'pull_request'
-        uses: JamesIves/github-pages-deploy-action@v4.4.1
+        uses: JamesIves/github-pages-deploy-action@v4.5.0
         with:
           clean: false
           branch: gh-pages

.github/workflows/pr-commands.yaml

@@ -4,7 +4,9 @@ on:
   issue_comment:
     types: [created]
 
-name: Commands
+name: pr-commands.yaml
+
+permissions: read-all
 
 jobs:
   document:
@@ -13,8 +15,10 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/pr-fetch@v2
         with:
@@ -50,8 +54,10 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/pr-fetch@v2
         with:

.github/workflows/test-coverage.yaml

@@ -6,7 +6,9 @@ on:
   pull_request:
     branches: [main, master]
 
-name: test-coverage
+name: test-coverage.yaml
+
+permissions: read-all
 
 jobs:
   test-coverage:
@@ -15,36 +17,45 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-r@v2
         with:
           use-public-rspm: true
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          extra-packages: any::covr
+          extra-packages: any::covr, any::xml2
           needs: coverage
 
       - name: Test coverage
         run: |
-          covr::codecov(
+          cov <- covr::package_coverage(
             quiet = FALSE,
             clean = FALSE,
-            install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
           )
+          covr::to_cobertura(cov)
         shell: Rscript {0}
 
+      - uses: codecov/codecov-action@v4
+        with:
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}
+
       - name: Show testthat output
         if: always()
         run: |
           ## --------------------------------------------------------------------
-          find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
+          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
         shell: bash
 
       - name: Upload test results
         if: failure()
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         with:
           name: coverage-test-failures
           path: ${{ runner.temp }}/package

README.Rmd

@@ -17,7 +17,7 @@ knitr::opts_chunk$set(
 <!-- badges: start -->
 [![CRAN status](https://www.r-pkg.org/badges/version/testthat)](https://cran.r-project.org/package=testthat)
 [![R-CMD-check](https://github.com/r-lib/testthat/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-lib/testthat/actions/workflows/R-CMD-check.yaml)
-[![Codecov test coverage](https://codecov.io/gh/r-lib/testthat/branch/main/graph/badge.svg)](https://app.codecov.io/gh/r-lib/testthat?branch=main)
+[![Codecov test coverage](https://codecov.io/gh/r-lib/testthat/graph/badge.svg)](https://app.codecov.io/gh/r-lib/testthat)
 <!-- badges: end -->
 
 ## Overview
@@ -31,12 +31,12 @@ Testing your code can be painful and tedious, but it greatly increases the quali
   on the command line, building test suites, or using R CMD check.
 
 * Displays test progress visually, showing a pass, fail, or error for every
-  expectation. If you're using the terminal or a recent version of RStudio, 
+  expectation. If you're using the terminal or a recent version of RStudio,
   it'll even colour the output.
 
-testthat draws inspiration from the xUnit family of testing packages, as well as from many of the innovative ruby testing libraries, like [rspec](https://rspec.info/), [testy](https://github.com/ahoward/testy), [bacon](https://github.com/leahneukirchen/bacon) and [cucumber](https://cucumber.io). 
+testthat draws inspiration from the xUnit family of testing packages, as well as from many of the innovative ruby testing libraries, like [rspec](https://rspec.info/), [testy](https://github.com/ahoward/testy), [bacon](https://github.com/leahneukirchen/bacon) and [cucumber](https://cucumber.io).
 
-testthat is the most popular unit testing package for R and is used by thousands of CRAN packages. 
+testthat is the most popular unit testing package for R and is used by thousands of CRAN packages.
 
 If you're not familiar with testthat, the [testing chapter](https://r-pkgs.org/testing-basics.html) in [R packages](https://r-pkgs.org) gives a good overview, along with workflow advice and concrete examples.
 

README.md

@@ -9,7 +9,7 @@
 status](https://www.r-pkg.org/badges/version/testthat)](https://cran.r-project.org/package=testthat)
 [![R-CMD-check](https://github.com/r-lib/testthat/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-lib/testthat/actions/workflows/R-CMD-check.yaml)
 [![Codecov test
-coverage](https://codecov.io/gh/r-lib/testthat/branch/main/graph/badge.svg)](https://app.codecov.io/gh/r-lib/testthat?branch=main)
+coverage](https://codecov.io/gh/r-lib/testthat/graph/badge.svg)](https://app.codecov.io/gh/r-lib/testthat)
 <!-- badges: end -->
 
 ## Overview