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Another cloud revdepcheck run
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‎revdep/README.md‎

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|:-------|:-------|:-----|:-------|:----|
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|butcher |? | | | |
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## New problems (1)
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|package |version |error |warning |note |
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|:------------------------------|:-------|:------|:-------|:----|
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|[portalr](problems.md#portalr) |0.3.6 |__+1__ |2 | |
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‎revdep/cran.md‎

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We checked 87 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
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* We saw 0 new problems
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* We saw 1 new problems
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* We failed to check 1 packages
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Issues with CRAN packages are summarised below.
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### New problems
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(This reports the first line of each new failure)
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* portalr
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checking tests ... ERROR
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### Failed to check
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* butcher (NA)

‎revdep/failures.md‎

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* this is package 'butcher' version '0.1.2'
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* package encoding: UTF-8
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* checking package namespace information ... OK
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* checking package dependencies ... ERROR
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Package suggested but not available: 'NMF'
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The suggested packages are required for a complete check.
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Checking can be attempted without them by setting the environment
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variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
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See section 'The DESCRIPTION file' in the 'Writing R Extensions'
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manual.
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* checking package dependencies ... NOTE
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Package suggested but not available for checking: 'NMF'
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* checking if this is a source package ... OK
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* checking if there is a namespace ... OK
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* checking for executable files ... OK
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* checking for hidden files and directories ... OK
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* checking for portable file names ... OK
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* checking for sufficient/correct file permissions ... OK
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* checking whether package 'butcher' can be installed ... OK
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* checking installed package size ... OK
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* checking package directory ... OK
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* checking 'build' directory ... OK
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* checking DESCRIPTION meta-information ... OK
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* checking top-level files ... OK
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* checking for left-over files ... OK
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* checking index information ... OK
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* checking package subdirectories ... OK
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* checking R files for non-ASCII characters ... OK
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* checking R files for syntax errors ... WARNING
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Warning in Sys.setlocale("LC_CTYPE", "en_US.UTF-8") :
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OS reports request to set locale to "en_US.UTF-8" cannot be honored
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* checking whether the package can be loaded ... OK
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* checking whether the package can be loaded with stated dependencies ... OK
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* checking whether the package can be unloaded cleanly ... OK
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* checking whether the namespace can be loaded with stated dependencies ... OK
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* checking whether the namespace can be unloaded cleanly ... OK
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* checking loading without being on the library search path ... OK
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* checking dependencies in R code ... NOTE
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Namespace in Imports field not imported from: 'modeldata'
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All declared Imports should be used.
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* checking S3 generic/method consistency ... OK
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* checking replacement functions ... OK
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* checking foreign function calls ... OK
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* checking R code for possible problems ... OK
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* checking Rd files ... OK
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* checking Rd metadata ... OK
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* checking Rd cross-references ... OK
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* checking for missing documentation entries ... OK
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* checking for code/documentation mismatches ... OK
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* checking Rd \usage sections ... OK
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* checking Rd contents ... OK
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* checking for unstated dependencies in examples ... OK
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* checking installed files from 'inst/doc' ... OK
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* checking files in 'vignettes' ... OK
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* checking examples ... WARNING
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checking a package with encoding 'UTF-8' in an ASCII locale
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* checking for unstated dependencies in 'tests' ... OK
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* checking tests ... OK
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Running 'testthat.R'
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* checking for unstated dependencies in vignettes ... OK
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* checking package vignettes in 'inst/doc' ... OK
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* checking running R code from vignettes ... NONE
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'adding-models-to-butcher.Rmd' using 'UTF-8'... OK
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'available-axe-methods.Rmd' using 'UTF-8'... OK
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'butcher.Rmd' using 'UTF-8'... OK
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* checking re-building of vignette outputs ... SKIPPED
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* DONE
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Status: 1 ERROR
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Status: 2 WARNINGs, 2 NOTEs
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* this is package 'butcher' version '0.1.2'
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* package encoding: UTF-8
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* checking package namespace information ... OK
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* checking package dependencies ... ERROR
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Package suggested but not available: 'NMF'
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The suggested packages are required for a complete check.
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Checking can be attempted without them by setting the environment
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variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
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See section 'The DESCRIPTION file' in the 'Writing R Extensions'
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manual.
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* checking package dependencies ... NOTE
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Package suggested but not available for checking: 'NMF'
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* checking if this is a source package ... OK
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* checking if there is a namespace ... OK
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* checking for executable files ... OK
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* checking for hidden files and directories ... OK
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* checking for portable file names ... OK
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* checking for sufficient/correct file permissions ... OK
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* checking whether package 'butcher' can be installed ... OK
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* checking installed package size ... OK
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* checking package directory ... OK
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* checking 'build' directory ... OK
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* checking DESCRIPTION meta-information ... OK
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* checking top-level files ... OK
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* checking for left-over files ... OK
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* checking index information ... OK
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* checking package subdirectories ... OK
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* checking R files for non-ASCII characters ... OK
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* checking R files for syntax errors ... WARNING
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Warning in Sys.setlocale("LC_CTYPE", "en_US.UTF-8") :
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OS reports request to set locale to "en_US.UTF-8" cannot be honored
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* checking whether the package can be loaded ... OK
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* checking whether the package can be loaded with stated dependencies ... OK
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* checking whether the package can be unloaded cleanly ... OK
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* checking whether the namespace can be loaded with stated dependencies ... OK
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* checking whether the namespace can be unloaded cleanly ... OK
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* checking loading without being on the library search path ... OK
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* checking dependencies in R code ... NOTE
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Namespace in Imports field not imported from: 'modeldata'
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All declared Imports should be used.
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* checking S3 generic/method consistency ... OK
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* checking replacement functions ... OK
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* checking foreign function calls ... OK
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* checking R code for possible problems ... OK
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* checking Rd files ... OK
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* checking Rd metadata ... OK
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* checking Rd cross-references ... OK
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* checking for missing documentation entries ... OK
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* checking for code/documentation mismatches ... OK
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* checking Rd \usage sections ... OK
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* checking Rd contents ... OK
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* checking for unstated dependencies in examples ... OK
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* checking installed files from 'inst/doc' ... OK
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* checking files in 'vignettes' ... OK
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* checking examples ... WARNING
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checking a package with encoding 'UTF-8' in an ASCII locale
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* checking for unstated dependencies in 'tests' ... OK
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* checking tests ... OK
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Running 'testthat.R'
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* checking for unstated dependencies in vignettes ... OK
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* checking package vignettes in 'inst/doc' ... OK
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* checking running R code from vignettes ... NONE
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'adding-models-to-butcher.Rmd' using 'UTF-8'... OK
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'available-axe-methods.Rmd' using 'UTF-8'... OK
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'butcher.Rmd' using 'UTF-8'... OK
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* checking re-building of vignette outputs ... SKIPPED
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* DONE
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Status: 1 ERROR
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Status: 2 WARNINGs, 2 NOTEs
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‎revdep/problems.md‎

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*Wow, no problems at all. :)*
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# portalr
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<details>
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* Version: 0.3.6
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* GitHub: https://github.com/weecology/portalr
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* Source code: https://github.com/cran/portalr
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* Date/Publication: 2020-11-23 19:00:02 UTC
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* Number of recursive dependencies: 109
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Run `cloud_details(, "portalr")` for more info
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</details>
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## Newly broken
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* checking tests ... ERROR
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```
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Running 'testthat.R'
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Running the tests in 'tests/testthat.R' failed.
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Last 13 lines of output:
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ERROR (test-10-summarize_ants.R:6:3): colony_presence_absence returns expected results
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Warning (test-10-summarize_ants.R:21:3): bait_presence_absence returns expected results
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Warning (test-10-summarize_ants.R:21:3): bait_presence_absence returns expected results
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ERROR (test-10-summarize_ants.R:21:3): bait_presence_absence returns expected results
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Warning (test-10-summarize_ants.R:34:3): colony_presence_absence returns expected results
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Warning (test-10-summarize_ants.R:34:3): colony_presence_absence returns expected results
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ERROR (test-10-summarize_ants.R:34:3): colony_presence_absence returns expected results
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Warning (test-10-summarize_ants.R:49:3): bait_presence_absence returns expected results
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ERROR (test-10-summarize_ants.R:49:3): bait_presence_absence returns expected results
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Warning (test-11-phenocam.R:6:1): (code run outside of `test_that()`)
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ERROR (test-11-phenocam.R:6:1): (code run outside of `test_that()`)
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[ FAIL 13 | WARN 46 | SKIP 39 | PASS 15 ]
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Error: Test failures
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Execution halted
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```
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## In both
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* checking R files for syntax errors ... WARNING
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```
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Warning in Sys.setlocale("LC_CTYPE", "en_US.UTF-8") :
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OS reports request to set locale to "en_US.UTF-8" cannot be honored
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```
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* checking examples ... WARNING
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```
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checking a package with encoding 'UTF-8' in an ASCII locale
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```
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