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README.md

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[PyStokes](https://github.com/rajeshrinet/pystokes) is a numerical library for phoresis and Stokesian hydrodynamics in Python. It uses a grid-free method, combining the integral representation of Laplace and Stokes equations, spectral expansion, and Galerkin discretization, to compute phoretic and hydrodynamic interactions between spheres with slip boundary conditions on their surfaces. The library also computes suspension scale quantities, such as rheological response, energy dissipation and fluid flow. The computational cost is quadratic in the number of particles and upto 1e5 particles have been accommodated on multicore computers. The library has been used to model suspensions of **microorganisms**, **synthetic autophoretic particles** and **self-propelling droplets**.
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A detailed description of above keywords is available in the [Wiki](https://github.com/rajeshrinet/pystokes/wiki). Please read the [Wiki](https://github.com/rajeshrinet/pystokes/wiki) before you use PyStokes for your research. Included below are some examples from [PyStokes Gallery](https://github.com/rajeshrinet/pystokes/wiki/Gallery)
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A detailed description of above keywords is available in the [Wiki](https://github.com/rajeshrinet/pystokes/wiki). Please read the PyStokes [paper](https://github.com/rajeshrinet/pystokes/tree/master/docs/paper) and [Wiki](https://github.com/rajeshrinet/pystokes/wiki) before you use PyStokes for your research. Included below are some examples from [PyStokes Gallery](https://github.com/rajeshrinet/pystokes/wiki/Gallery)
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![Image](https://raw.githubusercontent.com/rajeshrinet/pystokes-examples/master/gallery/2_volvox.gif)
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![Crystallization of active colloids](https://raw.githubusercontent.com/rajeshrinet/pystokes/master/examples/crystallite.gif)
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docs/sphinx/_build/html/_sources/index.rst.txt

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wallBounded
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periodic
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mima
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forceFields

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<li class="toctree-l1"><a class="reference internal" href="wallBounded.html">Stokes flow bounded by a wall</a></li>
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<li class="toctree-l1"><a class="reference internal" href="twoWalls.html">Stokes flow in a Hele-Shaw cell</a></li>
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<li class="toctree-l1"><a class="reference internal" href="periodic.html">Stokes flow in a periodic domain</a></li>
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<li class="toctree-l1"><a class="reference internal" href="mima.html">Mollified irreducible multipole approach</a></li>
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<li class="toctree-l1"><a class="reference internal" href="phoreticUnbounded.html">Phoresis in an unbounded domain</a></li>
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<li class="toctree-l1"><a class="reference internal" href="phoreticWallBounded.html">Phoresis in a space bounded by a wall</a></li>
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<li class="toctree-l1 current"><a class="current reference internal" href="#">Force fields in colloidal systems</a><ul>

docs/sphinx/_build/html/genindex.html

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<li class="toctree-l1"><a class="reference internal" href="wallBounded.html">Stokes flow bounded by a wall</a></li>
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<li class="toctree-l1"><a class="reference internal" href="twoWalls.html">Stokes flow in a Hele-Shaw cell</a></li>
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| <a href="#G"><strong>G</strong></a>
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| <a href="#I"><strong>I</strong></a>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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</ul></td>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li class="toctree-l1"><a class="reference internal" href="forceFields.html">Force fields in colloidal systems</a></li>
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<li class="toctree-l1"><a class="reference internal" href="wallBounded.html">Stokes flow bounded by a wall</a></li>
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<li class="toctree-l1"><a class="reference internal" href="mima.html">Mollified irreducible multipole approach</a></li>
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<li class="toctree-l1"><a class="reference internal" href="forceFields.html">Force fields in colloidal systems</a></li>
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