perl install.pl installation failed

[peiyu1223]

cd mirdeep2-0.1.3

perl install.pl

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Last update: Dec 03, 2017

This is the miRDeep2 installer

It is tested under a bash and zsh shell

It will try to download all necessary third-party tools and install them.

To run this installer you need to have mirdeep2.0.0.8 or later

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gcc version: 4.9.2 already installed, nothing to do ...
Checking environment variables ...
--2025-09-09 14:22:15-- https://sourceforge.net/projects/bowtie-bio/files/bowtie/
正在解析主机 sourceforge.net... 104.18.13.149, 104.18.12.149, 2606:4700::6812:c95, ...
正在连接 sourceforge.net|104.18.13.149|:443... 失败：连接超时。
正在连接 sourceforge.net|104.18.12.149|:443... 失败：连接超时。
正在连接 sourceforge.net|2606:4700::6812:c95|:443... 失败：网络不可达。
正在连接 sourceforge.net|2606:4700::6812:d95|:443... 失败：网络不可达。
bowtie already installed, nothing to do ...
RNAfold already installed, nothing to do ...
Downloading randfold now

--2025-09-09 14:26:30-- http://bioinformatics.psb.ugent.be/supplementary_data/erbon/nov2003/downloads/randfold-2.0.tar.gz
正在解析主机 bioinformatics.psb.ugent.be... 193.190.62.206
正在连接 bioinformatics.psb.ugent.be|193.190.62.206|:80... 已连接。
已发出 HTTP 请求，正在等待回应... 403 Forbidden
2025-09-09 14:26:41 错误 403：Forbidden。

randfold could not be downloaded
Please try to download randfold from here http://bioinformatics.psb.ugent.be/software/details/Randfold

The link indicates that the website has been moved, but the new website cannot be opened. How can I complete the installation?

[mschilli87]

@peiyu1223: Please contact the maintainers of randfold regarding download errors from their server. There is nothing we could do to fix that problem on their end.

Also have a look at #131 for a possible work-around.