notebooks to generate all figures in chapter 6 and the appendices

Author: ray-chew

visualiser_debugger/c6_nbs/enda_rmse.ipynb

@@ -11,7 +11,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": 18,
    "metadata": {},
    "outputs": [
     {
@@ -1135,123 +1135,62 @@
     "    print(proc2)"
    ]
   },
-  {
-   "cell_type": "markdown",
-   "metadata": {
-    "tags": []
-   },
-   "source": [
-    "# Merge scale analysis plots (SWE, Euler, RB)"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 36,
-   "metadata": {
-    "collapsed": true,
-    "jupyter": {
-     "outputs_hidden": true,
-     "source_hidden": true
-    },
-    "tags": []
-   },
-   "outputs": [
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "./output/scale_analysis_swe.pdf ./output/scale_analysis_euler.pdf ./output/scale_analysis_rb.pdf\n",
-      "['pdfjam', '--nup', '3x1', './output/scale_analysis_swe.pdf', './output/scale_analysis_euler.pdf', './output/scale_analysis_rb.pdf', '--outfile', './output/scale_analysis.pdf']\n",
-      "0\n",
-      "0\n"
-     ]
-    }
-   ],
-   "source": [
-    "dd = './output'\n",
-    "p1 = '%s/scale_analysis_swe.pdf' %dd\n",
-    "p2 = '%s/scale_analysis_euler.pdf' %dd\n",
-    "p3 = '%s/scale_analysis_rb.pdf' %dd\n",
-    "\n",
-    "ps = [p1,p2,p3]\n",
-    "p_long = p1\n",
-    "\n",
-    "for p in ps[1:]:\n",
-    "    p_long += ' ' + p\n",
-    "# print([p for p in ps])\n",
-    "print(p_long)\n",
-    "\n",
-    "call = ['pdfjam', '--nup', '3x1']\n",
-    "for p in ps:\n",
-    "    call += [p]\n",
-    "call += ['--outfile', '%s/scale_analysis.pdf' %dd]\n",
-    "print(call)\n",
-    "\n",
-    "proc1 = subprocess.call(call)\n",
-    "print(proc1)\n",
-    "if not proc1:\n",
-    "    proc2 = subprocess.call(['pdfcrop', '%s/scale_analysis.pdf' %dd, '%s/scale_analysis.pdf' %dd])\n",
-    "    print(proc2)"
-   ]
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "# Merge scale analysis plots (TV, RB)"
+    "# Merge scale analysis plot (SWE)"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 22,
    "metadata": {},
    "outputs": [
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
       "0\n",
-      "0\n",
-      "['pdfjam', '--nup', '1x2', './output/scale_analysis_euler.pdf', './output/scale_analysis_rb.pdf', '--outfile', './output/scaleAnalysis.pdf']\n",
+      "['pdfjam', '--nup', '1x1', './output/scale_analysis_swe.pdf', '--outfile', './output/SWEscaleAnalysis.pdf']\n",
       "0\n",
       "0\n"
      ]
     }
    ],
    "source": [
     "dd = './output'\n",
-    "p1 = '%s/scale_analysis_euler.pdf' %dd\n",
-    "p2 = '%s/scale_analysis_rb.pdf' %dd\n",
+    "p1 = '%s/scale_analysis_swe.pdf' %dd\n",
     "\n",
-    "ps = [p1,p2]\n",
+    "ps = [p1]\n",
     "\n",
     "for p in ps:\n",
     "    proc0 = subprocess.call(['pdfcrop', '%s' %(p), '%s' %(p)])\n",
     "    print(proc0)\n",
     "\n",
-    "call = ['pdfjam', '--nup', '1x2']\n",
+    "call = ['pdfjam', '--nup', '1x1']\n",
     "for p in ps:\n",
     "    call += [p]\n",
-    "call += ['--outfile', '%s/scaleAnalysis.pdf' %dd]\n",
+    "call += ['--outfile', '%s/SWEscaleAnalysis.pdf' %dd]\n",
     "print(call)\n",
     "\n",
     "proc1 = subprocess.call(call)\n",
     "print(proc1)\n",
     "if not proc1:\n",
-    "    proc2 = subprocess.call(['pdfcrop', '%s/scaleAnalysis.pdf' %dd, '%s/scaleAnalysis.pdf' %dd])\n",
+    "    proc2 = subprocess.call(['pdfcrop', '%s/SWEscaleAnalysis.pdf' %dd, '%s/SWEscaleAnalysis.pdf' %dd])\n",
     "    print(proc2)"
    ]
   },
   {
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "# Merge scale analysis plots (arXiv)"
+    "# Merge scale analysis plots (TV, RB)"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 24,
    "metadata": {},
    "outputs": [
     {
@@ -1260,7 +1199,7 @@
      "text": [
       "0\n",
       "0\n",
-      "['pdfjam', '--nup', '1x2', './output/scale_analysis_euler.pdf', './output/scale_analysis_rb.pdf', '--outfile', './output/scaleAnalysis.pdf']\n",
+      "['pdfjam', '--nup', '2x1', './output/scale_analysis_euler.pdf', './output/scale_analysis_rb.pdf', '--outfile', './output/scaleAnalysis.pdf']\n",
       "0\n",
       "0\n"
      ]
@@ -1277,7 +1216,7 @@
     "    proc0 = subprocess.call(['pdfcrop', '%s' %(p), '%s' %(p)])\n",
     "    print(proc0)\n",
     "\n",
-    "call = ['pdfjam', '--nup', '1x2']\n",
+    "call = ['pdfjam', '--nup', '2x1']\n",
     "for p in ps:\n",
     "    call += [p]\n",
     "call += ['--outfile', '%s/scaleAnalysis.pdf' %dd]\n",
@@ -1294,51 +1233,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "# Merge poster/slides rb contour plots"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 5,
-   "metadata": {},
-   "outputs": [
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "./output/rb_deltap_contour_comp_slides.pdf ./output/rb_deltap_contour_psinc_slides.pdf\n",
-      "['pdfjam', '--nup', '2x1', './output/rb_deltap_contour_comp_slides.pdf', './output/rb_deltap_contour_psinc_slides.pdf', '--outfile', './output/rb_deltap_contour_slides.pdf', '--delta', '0.2cm 0.2cm']\n",
-      "66\n"
-     ]
-    }
-   ],
-   "source": [
-    "dd = './output'\n",
-    "p1 = '%s/rb_deltap_contour_comp_slides.pdf' %dd\n",
-    "p2 = '%s/rb_deltap_contour_psinc_slides.pdf' %dd\n",
-    "\n",
-    "out_name = 'rb_deltap_contour_slides'\n",
-    "\n",
-    "ps = [p1,p2]\n",
-    "p_long = p1\n",
-    "\n",
-    "for p in ps[1:]:\n",
-    "    p_long += ' ' + p\n",
-    "# print([p for p in ps])\n",
-    "print(p_long)\n",
-    "\n",
-    "call = ['pdfjam', '--nup', '2x1']\n",
-    "for p in ps:\n",
-    "    call += [p]\n",
-    "call += ['--outfile', '%s/%s.pdf' %(dd,out_name)]\n",
-    "call += ['--delta', '0.2cm 0.2cm']\n",
-    "print(call)\n",
-    "\n",
-    "proc1 = subprocess.call(call)\n",
-    "print(proc1)\n",
-    "if not proc1:\n",
-    "    proc2 = subprocess.call(['pdfcrop', '%s/%s.pdf' %(dd,out_name), '%s/%s.pdf' %(dd,out_name)])\n",
-    "    print(proc2)"
+    "# Merge scale analysis plots (arXiv)"
    ]
   },
   {