latest notebooks used to generate plots for the resubmission

they probably need a bit of cleaning up but I will not do that unless necessary

Author: ray-chew

visualiser_debugger/review_localdab/ic_obs_truth.ipynb

@@ -11,7 +11,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 6,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [
     {
@@ -34,9 +34,7 @@
   {
    "cell_type": "markdown",
    "metadata": {
-    "jupyter": {
-     "source_hidden": true
-    }
+    "tags": []
    },
    "source": [
     "# Vortex ICs (old)"
@@ -102,22 +100,18 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 20,
+   "execution_count": 9,
    "metadata": {},
    "outputs": [
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "./output/initial_euler_exner.pdf\n",
       "0\n",
-      "./output/initial_euler_rhou.pdf\n",
       "0\n",
-      "./output/initial_euler_vortz.pdf\n",
       "0\n",
-      "./output/initial_euler_pt.pdf\n",
       "0\n",
-      "['pdfjam', '--nup', '2x2', './output/initial_euler_exner.pdf', './output/initial_euler_rhou.pdf', './output/initial_euler_vortz.pdf', './output/initial_euler_pt.pdf', '--outfile', './output/initialVortices.pdf', '--delta', '0.2cm 0.2cm']\n",
+      "['pdfjam', '--nup', '2x2', './output/initial_euler_exner.pdf', './output/initial_euler_rhou.pdf', './output/initial_euler_vortz.pdf', './output/initial_euler_pt.pdf', '--outfile', './output/initialVortices.pdf', '--delta', '0.4cm 0.4cm']\n",
       "0\n",
       "0\n"
      ]
@@ -143,7 +137,7 @@
     "for p in ps:\n",
     "    call += [p]\n",
     "call += ['--outfile', '%s/%s.pdf' %(dd,out_name)]\n",
-    "call += ['--delta', '0.2cm 0.2cm']\n",
+    "call += ['--delta', '0.4cm 0.4cm']\n",
     "print(call)\n",
     "\n",
     "proc1 = subprocess.call(call)\n",
@@ -269,9 +263,7 @@
   {
    "cell_type": "markdown",
    "metadata": {
-    "jupyter": {
-     "source_hidden": true
-    }
+    "tags": []
    },
    "source": [
     "# Blending comparison with balanced ICs (vortex)"
@@ -337,15 +329,15 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 9,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
       "./output/euler_w_imbal.pdf ./output/euler_w_bal.pdf\n",
-      "['pdfjam', '--nup', '1x2', './output/euler_w_imbal.pdf', './output/euler_w_bal.pdf', '--outfile', './output/comparisonswBalImbal.pdf', '--delta', '0.2cm 0.2cm']\n",
+      "['pdfjam', '--nup', '2x1', './output/euler_w_imbal.pdf', './output/euler_w_bal.pdf', '--outfile', './output/comparisonswBalImbal.pdf', '--delta', '0.2cm 0.2cm']\n",
       "0\n",
       "0\n"
      ]
@@ -366,7 +358,7 @@
     "# print([p for p in ps])\n",
     "print(p_long)\n",
     "\n",
-    "call = ['pdfjam', '--nup', '1x2']\n",
+    "call = ['pdfjam', '--nup', '2x1']\n",
     "for p in ps:\n",
     "    call += [p]\n",
     "call += ['--outfile', '%s/%s.pdf' %(dd,out_name)]\n",
@@ -581,7 +573,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 10,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -817,7 +809,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 7,
+   "execution_count": 12,
    "metadata": {},
    "outputs": [
     {
@@ -828,7 +820,7 @@
       "0\n",
       "0\n",
       "0\n",
-      "['pdfjam', '--nup', '2x2', './output/obs_euler_rhou.pdf', './output/euler_truth_rhou.pdf', './output/obs_euler_p2_nodes.pdf', './output/euler_truth.pdf', '--outfile', './output/obsTruth.pdf', '--delta', '0.2cm 0.2cm']\n",
+      "['pdfjam', '--nup', '2x2', './output/obs_euler_rhou.pdf', './output/euler_truth_rhou.pdf', './output/obs_euler_p2_nodes.pdf', './output/euler_truth.pdf', '--outfile', './output/obsTruth.pdf', '--delta', '0.4cm 0.4cm']\n",
       "0\n",
       "0\n"
      ]
@@ -853,7 +845,7 @@
     "for p in ps:\n",
     "    call += [p]\n",
     "call += ['--outfile', '%s/%s.pdf' %(dd,out_name)]\n",
-    "call += ['--delta', '0.2cm 0.2cm']\n",
+    "call += ['--delta', '0.4cm 0.4cm']\n",
     "print(call)\n",
     "\n",
     "proc1 = subprocess.call(call)\n",
@@ -872,7 +864,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 8,
+   "execution_count": 13,
    "metadata": {},
    "outputs": [
     {
@@ -1029,7 +1021,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 11,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -1077,7 +1069,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 7,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -1125,7 +1117,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [
     {
@@ -1134,8 +1126,7 @@
      "text": [
       "./output/rb_deltap_contour_comp_slides.pdf ./output/rb_deltap_contour_psinc_slides.pdf\n",
       "['pdfjam', '--nup', '2x1', './output/rb_deltap_contour_comp_slides.pdf', './output/rb_deltap_contour_psinc_slides.pdf', '--outfile', './output/rb_deltap_contour_slides.pdf', '--delta', '0.2cm 0.2cm']\n",
-      "0\n",
-      "0\n"
+      "66\n"
      ]
     }
    ],