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Merge pull request #271 from lucamar/patch-2
Fix sanity checking for GROMACS test
2 parents 711acb7 + b3361b2 commit 7345432

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cscs-checks/apps/gromacs/gromacs_check.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -18,9 +18,9 @@ def __init__(self, name, output_file, **kwargs):
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self.keep_files = [output_file]
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energy = sn.extractsingle(r'\s+Potential\s+Kinetic En\.\s+Total Energy'
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r'\s+Temperature\s+Pressure \(bar\)\n'
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r'\s+Conserved En\.\s+Temperature\n'
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r'(\s+\S+){2}\s+(?P<energy>\S+)(\s+\S+){2}\n'
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r'\s+Constr\. rmsd',
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r'\s+Pressure \(bar\)\s+Constr\. rmsd',
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output_file, 'energy', float, item=-1)
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energy_reference = -3270799.9
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energy_diff = sn.abs(energy - energy_reference)

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