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{:deps/prep-lib {:ensure "target/classes"
:alias :build
:fn compile-java}
:paths ["src" "src-java" "target/classes" "resources"]
:deps {org.clojure/clojure {:mvn/version "1.12.0"}
;; PSS for tree structure with persistence
org.replikativ/persistent-sorted-set {:mvn/version "0.4.119"}
;; konserve for durable storage
org.replikativ/konserve {:mvn/version "0.9.345"
:exclusions [org.clojure/clojurescript
com.github.pkpkpk/cljs-node-io
com.github.pkpkpk/fress
org.clojars.mmb90/cljs-cache]}
;; hasch for content-addressed commit IDs (crypto-hash mode)
org.replikativ/hasch {:mvn/version "0.3.96"
:exclusions [org.clojure/clojurescript
com.cognitect/transit-cljs]}
;; core.cache for LRU caching in PSS-backed storage
org.clojure/core.cache {:mvn/version "1.1.234"}
;; Malli for API specification and validation
metosin/malli {:mvn/version "0.20.0"}
;; JSqlParser for SQL → AST parsing (single JAR, zero transitive deps)
com.github.jsqlparser/jsqlparser {:mvn/version "5.1"}
;; Parquet import (minimal Hadoop — Configuration class required by ParquetFileReader)
org.apache.parquet/parquet-column {:mvn/version "1.15.1"}
org.apache.parquet/parquet-hadoop {:mvn/version "1.15.1"
:exclusions [org.apache.hadoop/hadoop-client]}
org.apache.hadoop/hadoop-mapreduce-client-core {:mvn/version "3.4.1"
:exclusions [org.apache.hadoop/hadoop-yarn-common
org.apache.hadoop/hadoop-yarn-client
org.apache.hadoop/hadoop-hdfs-client
io.netty/netty-all]}
org.apache.hadoop/hadoop-common {:mvn/version "3.4.1"
:exclusions [org.apache.hadoop/hadoop-auth
org.apache.hadoop.thirdparty/hadoop-shaded-protobuf_3_25
org.apache.curator/curator-framework
org.apache.curator/curator-client
org.apache.curator/curator-recipes
org.apache.commons/commons-configuration2
org.apache.commons/commons-text
org.apache.commons/commons-math3
org.apache.httpcomponents/httpclient
org.apache.kerby/kerb-core
org.apache.avro/avro
org.apache.zookeeper/zookeeper
com.google.protobuf/protobuf-java
com.google.code.gson/gson
com.google.re2j/re2j
com.google.code.findbugs/jsr305
com.fasterxml.jackson.core/jackson-databind
com.sun.jersey/jersey-core
com.sun.jersey/jersey-servlet
com.jcraft/jsch
io.dropwizard.metrics/metrics-core
org.eclipse.jetty/jetty-server
org.eclipse.jetty/jetty-servlet
org.eclipse.jetty/jetty-util
org.eclipse.jetty/jetty-webapp
dnsjava/dnsjava
javax.servlet/javax.servlet-api]}}
:aliases
{:dev
{:extra-paths ["dev" "test" "bench" "notebooks"]
:extra-deps {nrepl/nrepl {:mvn/version "1.3.0"}
cider/cider-nrepl {:mvn/version "0.50.2"}
criterium/criterium {:mvn/version "0.4.6"}
com.clojure-goes-fast/clj-async-profiler {:mvn/version "1.6.2"}
com.clojure-goes-fast/clj-memory-meter {:mvn/version "0.3.0"}
;; tech.ml.dataset for dataframe interop
techascent/tech.ml.dataset {:mvn/version "7.037"}
;; tablecloth for high-level dataframe operations
scicloj/tablecloth {:mvn/version "7.062"}
;; Kindly for notebook rendering hints
org.scicloj/kindly {:mvn/version "4-beta23"}
;; Clay for rendering notebooks
org.scicloj/clay {:mvn/version "2.0.13"}
;; Datahike for entity DB integration examples
io.replikativ/datahike {:mvn/version "0.6.1570"}
;; DuckDB JDBC for benchmark validation
org.duckdb/duckdb_jdbc {:mvn/version "1.4.4.0"}}
:jvm-opts ["-Djdk.attach.allowAttachSelf=true"
"-XX:+UnlockDiagnosticVMOptions"
"-XX:+DebugNonSafepoints"
"-XX:+UseG1GC"
"-Xmx4g"
;; Enable Vector API for SIMD
"--add-modules=jdk.incubator.vector"
;; Enable foreign memory API
"--enable-native-access=ALL-UNNAMED"]}
:repl
{:extra-paths ["dev" "test" "bench" "notebooks"]
:extra-deps {nrepl/nrepl {:mvn/version "1.3.0"}
cider/cider-nrepl {:mvn/version "0.50.2"}
criterium/criterium {:mvn/version "0.4.6"}
com.clojure-goes-fast/clj-async-profiler {:mvn/version "1.6.2"}
;; tech.ml.dataset for dataframe interop
techascent/tech.ml.dataset {:mvn/version "7.037"}
;; tablecloth for high-level dataframe operations
scicloj/tablecloth {:mvn/version "7.062"}
;; Kindly for notebook rendering hints
org.scicloj/kindly {:mvn/version "4-beta23"}
;; Clay for rendering notebooks
org.scicloj/clay {:mvn/version "2.0.13"}
;; Datahike for entity DB integration notebooks
io.replikativ/datahike {:mvn/version "0.6.1570"}
;; DuckDB JDBC for benchmark validation
org.duckdb/duckdb_jdbc {:mvn/version "1.4.4.0"}
;; Yggdrasil for CoW protocol compliance
org.replikativ/yggdrasil {:mvn/version "0.2.20"}}
:jvm-opts ["-Djdk.attach.allowAttachSelf=true"
"-XX:+UnlockDiagnosticVMOptions"
"-XX:+DebugNonSafepoints"
"-Xmx4g"
"--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"]
:main-opts ["-m" "nrepl.cmdline"
"--middleware" "[cider.nrepl/cider-middleware]"]}
;; GPU support (optional - requires CUDA)
:gpu
{:extra-deps {uncomplicate/clojurecuda {:mvn/version "0.18.0"}
uncomplicate/neanderthal {:mvn/version "0.49.1"}
;; JavaCPP CUDA - large download!
org.bytedeco/cuda {:mvn/version "12.3-8.9-1.5.10"
:classifier "linux-x86_64-redist"}}
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"]}
:test
{:extra-paths ["test" "notebooks"]
:extra-deps {io.github.cognitect-labs/test-runner
{:git/tag "v0.5.1" :git/sha "dfb30dd"}
;; test.check for generative/property-based testing
org.clojure/test.check {:mvn/version "1.1.1"}
;; tech.ml.dataset for dataframe interop (test-only)
techascent/tech.ml.dataset {:mvn/version "7.037"}
;; tablecloth for high-level dataframe operations (test-only)
scicloj/tablecloth {:mvn/version "7.062"}
;; Kindly for notebook rendering hints
org.scicloj/kindly {:mvn/version "4-beta23"}
;; Yggdrasil for CoW protocol compliance (optional, test-only)
org.replikativ/yggdrasil {:mvn/version "0.2.20"}}
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"--add-opens=java.base/sun.nio.ch=ALL-UNNAMED"]
:main-opts ["-m" "cognitect.test-runner"]}
;; CI test alias (no local yggdrasil dep, excludes yggdrasil tests)
:ci
{:extra-paths ["test" "notebooks"]
:extra-deps {io.github.cognitect-labs/test-runner
{:git/tag "v0.5.1" :git/sha "dfb30dd"}
org.clojure/test.check {:mvn/version "1.1.1"}
techascent/tech.ml.dataset {:mvn/version "7.037"}
scicloj/tablecloth {:mvn/version "7.062"}
org.scicloj/kindly {:mvn/version "4-beta23"}}
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"--add-opens=java.base/sun.nio.ch=ALL-UNNAMED"]
:main-opts ["-m" "cognitect.test-runner"
"--namespace-regex" "^stratum\\.(?!yggdrasil|benchmark).*"]}
:olap
{:extra-paths ["bench"]
:extra-deps {criterium/criterium {:mvn/version "0.4.6"}
org.roaringbitmap/RoaringBitmap {:mvn/version "1.3.0"}
org.duckdb/duckdb_jdbc {:mvn/version "1.4.4.0"}}
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"-Xmx8g"]
:main-opts ["-m" "olap-bench"]}
:iforest
{:extra-paths ["bench"]
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"-Xmx8g"]
:main-opts ["-m" "iforest-bench"]}
:insert-bench
{:extra-paths ["bench"]
:extra-deps {org.roaringbitmap/RoaringBitmap {:mvn/version "1.3.0"}}
:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"-Xmx8g"]
:main-opts ["-m" "insert-bench"]}
:server
{:jvm-opts ["--add-modules=jdk.incubator.vector"
"--enable-native-access=ALL-UNNAMED"
"-Xmx4g"]
:main-opts ["-m" "stratum.server"]}
;; Build tooling (jar, uberjar, deploy)
:build
{:deps {io.github.clojure/tools.build {:mvn/version "0.10.7"}
slipset/deps-deploy {:mvn/version "0.2.2"}}
:ns-default build}
;; Use published deps (for CI/release)
:release
{:override-deps {org.replikativ/persistent-sorted-set {:mvn/version "0.4.119"}
org.replikativ/konserve {:mvn/version "0.9.345"
:exclusions [org.clojure/clojurescript
com.github.pkpkpk/cljs-node-io
com.github.pkpkpk/fress
org.clojars.mmb90/cljs-cache]}
org.replikativ/hasch {:mvn/version "0.3.96"
:exclusions [org.clojure/clojurescript
com.cognitect/transit-cljs]}}}
:format {:extra-deps {cljfmt/cljfmt {:mvn/version "0.9.2"}}
:main-opts ["-m" "cljfmt.main" "check"]}
:ffix {:extra-deps {cljfmt/cljfmt {:mvn/version "0.9.2"}}
:main-opts ["-m" "cljfmt.main" "fix"]}}}