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Simulate.ipynb

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"''' \n",
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" 1.\n",
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" \n",
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" STIMULATION PATTERN DESIGN \n",
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" PARAMETRIZATION \n",
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" \n",
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" In this section you can set the foundamental parameters for the design of the stimulation protocol.\n",
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" In this section you can set the foundamental parameters for run your simulation.\n",
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" The model allows you to simulate both PRE-SYNAPTIC and POST-SYNAPTIC stimuli.\n",
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" Both pre-synaptic and post-synaptic action potentials can be modelled independently \n",
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" as two-frequencies based trains of impulses, allowing the creation of highly customizable stimulation patterns. \n",
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" In this design paradigm, the first frequency sets the base frequency of each train, while the second one describes \n",
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" the intertrain interval.\n",
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" as two-frequencies based trains of bursts, allowing the creation of highly customizable stimulation patterns. \n",
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" In this design paradigm, the first frequency sets the intraburst frequency, while the second one describes \n",
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" the interburst frequency.\n",
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" \n",
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" Pre-synaptic action potentials are directly modelled as free glutamate pulses which is pumped into the system.\n",
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" Both the amplitude (i.e. the amount of the glutamate that will be released) and the width (i.e. the time duration each \n",

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