Skip to content

Commit 0e355ed

Browse files
schloerkeschloerke
committed
preemptively run revdepcheck. 5 failures.
1 parent 80a9ff4 commit 0e355ed

File tree

3 files changed

+250
-20
lines changed

3 files changed

+250
-20
lines changed

‎revdep/README.md‎

Lines changed: 17 additions & 16 deletions
Original file line numberDiff line numberDiff line change
@@ -1,28 +1,29 @@
11
# Revdeps
22

3-
## Failed to check (22)
3+
## Failed to check (12)
44

55
|package |version |error |warning |note |
66
|:--------------------|:-------|:-----|:-------|:----|
7-
|bigPint |? | | | |
8-
|bioCancer |? | | | |
9-
|EBImage |? | | | |
10-
|FAfA |0.3 |1 | | |
7+
|EMMAgeo |? | | | |
8+
|FAfA |? | | | |
119
|fio |0.1.6 |1 | | |
12-
|GeneNetworkBuilder |? | | | |
13-
|gradientPickerD3 |? | | | |
14-
|InterCellar |? | | | |
15-
|LACE |? | | | |
10+
|GDINA |? | | | |
11+
|GSVA |? | | | |
1612
|lavaan.shiny |1.2 |1 | | |
17-
|LDABiplots |? | | | |
18-
|LDAShiny |? | | | |
1913
|loon.shiny |? | | | |
20-
|MatrixQCvis |? | | | |
21-
|metricsgraphics |? | | | |
22-
|modchart |? | | | |
23-
|omicsViewer |? | | | |
24-
|RSP |0.4 |1 | | |
14+
|Prostar |? | | | |
2515
|rstanarm |2.32.1 |1 | | |
2616
|sphereML |0.1.1 |1 | | |
2717
|StatTeacherAssistant |? | | | |
2818
|TestAnaAPP |1.1.2 |1 | | |
19+
20+
## New problems (5)
21+
22+
|package |version |error |warning |note |
23+
|:-------------|:-------|:------|:-------|:------|
24+
|[omicsTools](problems.md#omicstools)|1.0.5 |__+1__ | | |
25+
|[PopED](problems.md#poped)|0.7.0 | | |__+1__ |
26+
|[shinyGovstyle](problems.md#shinygovstyle)|0.1.0 |__+1__ | | |
27+
|[ShinyLink](problems.md#shinylink)|0.2.2 |__+1__ | | |
28+
|[shinySbm](problems.md#shinysbm)|0.1.5 |__+1__ | |1 |
29+

‎revdep/cran.md‎

Lines changed: 21 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,19 +1,37 @@
11
## revdepcheck results
22

3-
We checked 1344 reverse dependencies (1330 from CRAN + 14 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
3+
We checked 1349 reverse dependencies (1345 from CRAN + 4 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
44

5-
* We saw 0 new problems
5+
* We saw 5 new problems
66
* We failed to check 8 packages
77

88
Issues with CRAN packages are summarised below.
99

10+
### New problems
11+
(This reports the first line of each new failure)
12+
13+
* omicsTools
14+
checking tests ... ERROR
15+
16+
* PopED
17+
checking installed package size ... NOTE
18+
19+
* shinyGovstyle
20+
checking tests ... ERROR
21+
22+
* ShinyLink
23+
checking tests ... ERROR
24+
25+
* shinySbm
26+
checking tests ... ERROR
27+
1028
### Failed to check
1129

1230
* FAfA (NA)
1331
* fio (NA)
32+
* GDINA (NA)
1433
* lavaan.shiny (NA)
1534
* loon.shiny (NA)
16-
* RSP (NA)
1735
* rstanarm (NA)
1836
* sphereML (NA)
1937
* TestAnaAPP (NA)

‎revdep/problems.md‎

Lines changed: 212 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1 +1,212 @@
1-
*Wow, no problems at all. :)*
1+
# omicsTools
2+
3+
<details>
4+
5+
* Version: 1.0.5
6+
* GitHub: https://github.com/YaoxiangLi/omicsTools
7+
* Source code: https://github.com/cran/omicsTools
8+
* Date/Publication: 2023-07-03 16:20:02 UTC
9+
* Number of recursive dependencies: 87
10+
11+
Run `revdepcheck::cloud_details(, "omicsTools")` for more info
12+
13+
</details>
14+
15+
## Newly broken
16+
17+
* checking tests ... ERROR
18+
```
19+
Running ‘spelling.R’
20+
Running ‘testthat.R’
21+
Running the tests in ‘tests/testthat.R’ failed.
22+
Complete output:
23+
> # This file is part of the standard setup for testthat.
24+
> # It is recommended that you do not modify it.
25+
> #
26+
> # Where should you do additional test configuration?
27+
> # Learn more about the roles of various files in:
28+
> # * https://r-pkgs.org/tests.html
29+
...
30+
31+
lines(actual) vs lines(expected)
32+
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
33+
- " <span class=\"action-label\">go</span>"
34+
- "</button>"
35+
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
36+
37+
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
38+
Error: Test failures
39+
Execution halted
40+
```
41+
42+
# PopED
43+
44+
<details>
45+
46+
* Version: 0.7.0
47+
* GitHub: https://github.com/andrewhooker/PopED
48+
* Source code: https://github.com/cran/PopED
49+
* Date/Publication: 2024-10-07 19:30:02 UTC
50+
* Number of recursive dependencies: 139
51+
52+
Run `revdepcheck::cloud_details(, "PopED")` for more info
53+
54+
</details>
55+
56+
## Newly broken
57+
58+
* checking installed package size ... NOTE
59+
```
60+
installed size is 5.5Mb
61+
sub-directories of 1Mb or more:
62+
R 1.5Mb
63+
doc 1.4Mb
64+
test 1.1Mb
65+
```
66+
67+
# shinyGovstyle
68+
69+
<details>
70+
71+
* Version: 0.1.0
72+
* GitHub: https://github.com/moj-analytical-services/shinyGovstyle
73+
* Source code: https://github.com/cran/shinyGovstyle
74+
* Date/Publication: 2024-09-12 14:40:02 UTC
75+
* Number of recursive dependencies: 48
76+
77+
Run `revdepcheck::cloud_details(, "shinyGovstyle")` for more info
78+
79+
</details>
80+
81+
## Newly broken
82+
83+
* checking tests ... ERROR
84+
```
85+
Running ‘testthat.R’
86+
Running the tests in ‘tests/testthat.R’ failed.
87+
Complete output:
88+
> library(testthat)
89+
> library(shinyGovstyle)
90+
>
91+
> test_check("shinyGovstyle")
92+
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
93+
94+
══ Failed tests ════════════════════════════════════════════════════════════════
95+
── Failure ('test-backlink_Input.R:4:3'): backlink works ───────────────────────
96+
backlink_check$children[[1]][[2]] not identical to "Back".
97+
target is NULL, current is character
98+
99+
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
100+
Error: Test failures
101+
Execution halted
102+
```
103+
104+
# ShinyLink
105+
106+
<details>
107+
108+
* Version: 0.2.2
109+
* GitHub: NA
110+
* Source code: https://github.com/cran/ShinyLink
111+
* Date/Publication: 2023-01-18 11:40:05 UTC
112+
* Number of recursive dependencies: 129
113+
114+
Run `revdepcheck::cloud_details(, "ShinyLink")` for more info
115+
116+
</details>
117+
118+
## Newly broken
119+
120+
* checking tests ... ERROR
121+
```
122+
Running ‘spelling.R’
123+
Running ‘testthat.R’
124+
Running the tests in ‘tests/testthat.R’ failed.
125+
Complete output:
126+
> # This file is part of the standard setup for testthat.
127+
> # It is recommended that you do not modify it.
128+
> #
129+
> # Where should you do additional test configuration?
130+
> # Learn more about the roles of various files in:
131+
> # * https://r-pkgs.org/tests.html
132+
...
133+
134+
lines(actual) vs lines(expected)
135+
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
136+
- " <span class=\"action-label\">go</span>"
137+
- "</button>"
138+
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
139+
140+
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
141+
Error: Test failures
142+
Execution halted
143+
```
144+
145+
# shinySbm
146+
147+
<details>
148+
149+
* Version: 0.1.5
150+
* GitHub: https://github.com/Jo-Theo/shinySbm
151+
* Source code: https://github.com/cran/shinySbm
152+
* Date/Publication: 2023-09-07 21:50:02 UTC
153+
* Number of recursive dependencies: 134
154+
155+
Run `revdepcheck::cloud_details(, "shinySbm")` for more info
156+
157+
</details>
158+
159+
## Newly broken
160+
161+
* checking tests ... ERROR
162+
```
163+
Running ‘spelling.R’
164+
Running ‘testthat.R’
165+
Running the tests in ‘tests/testthat.R’ failed.
166+
Complete output:
167+
> # This file is part of the standard setup for testthat.
168+
> # It is recommended that you do not modify it.
169+
> #
170+
> # Where should you do additional test configuration?
171+
> # Learn more about the roles of various files in:
172+
> # * https://r-pkgs.org/tests.html
173+
...
174+
175+
lines(actual) vs lines(expected)
176+
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
177+
- " <span class=\"action-label\">go</span>"
178+
- "</button>"
179+
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
180+
181+
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 141 ]
182+
Error: Test failures
183+
Execution halted
184+
```
185+
186+
## In both
187+
188+
* checking Rd files ... NOTE
189+
```
190+
checkRd: (-1) FungusTreeNetwork.Rd:15-21: Lost braces in \itemize; meant \describe ?
191+
checkRd: (-1) FungusTreeNetwork.Rd:22-28: Lost braces in \itemize; meant \describe ?
192+
checkRd: (-1) FungusTreeNetwork.Rd:33-34: Lost braces in \itemize; meant \describe ?
193+
checkRd: (-1) FungusTreeNetwork.Rd:33: Lost braces; missing escapes or markup?
194+
33 | \item{tree_tree}{Results of \code{estimateSimpleSBM} for {sbm}
195+
| ^
196+
checkRd: (-1) FungusTreeNetwork.Rd:35-36: Lost braces in \itemize; meant \describe ?
197+
checkRd: (-1) FungusTreeNetwork.Rd:35: Lost braces; missing escapes or markup?
198+
35 | \item{fungus_tree}{Results of \code{estimateBipartiteSBM} for {sbm}
199+
| ^
200+
...
201+
checkRd: (-1) visSbm.default.Rd:25: Lost braces in \itemize; meant \describe ?
202+
checkRd: (-1) visSbm.default.Rd:26: Lost braces in \itemize; meant \describe ?
203+
checkRd: (-1) visSbm.default.Rd:43-44: Lost braces in \itemize; meant \describe ?
204+
checkRd: (-1) visSbm.default.Rd:45: Lost braces in \itemize; meant \describe ?
205+
checkRd: (-1) visSbm.default.Rd:46: Lost braces in \itemize; meant \describe ?
206+
checkRd: (-1) visSbm.default.Rd:47: Lost braces in \itemize; meant \describe ?
207+
checkRd: (-1) visSbm.default.Rd:48: Lost braces in \itemize; meant \describe ?
208+
checkRd: (-1) visSbm.default.Rd:49: Lost braces in \itemize; meant \describe ?
209+
checkRd: (-1) visSbm.default.Rd:50: Lost braces in \itemize; meant \describe ?
210+
checkRd: (-1) visSbm.default.Rd:51: Lost braces in \itemize; meant \describe ?
211+
```
212+

0 commit comments

Comments
 (0)