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fix spelling of bioRxiv
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README.md

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# CSI-Microbes Identification
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This repository contains part of the workflows for reproducing the results from the bioarxiv paper [CSI-Microbes: Identifying cell-type specific intracellular microbes from single-cell RNA-seq data](https://www.biorxiv.org/content/10.1101/2020.05.14.096230v1) by Welles Robinson, Fiorella Schischlik, E. Michael Gertz, Joo Sang Lee, Kaiyuan Zhu, S. Cenk Sahinalp, Rob Patro, Mark D.M. Leiserson, Alejandro A. Schäffer, and Eytan Ruppin. This repository contains the workflows to identify microbial reads from 10x and Smart-seq2 scRNA-seq datasets. These microbial reads can then be analyzed using the [CSI-Microbes-analysis repository](https://github.com/ruppinlab/CSI-Microbes-analysis). The code in this repository was written by Welles Robinson and alpha-tested by Alejandro Schaffer.
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This repository contains part of the workflows for reproducing the results from the bioRxiv paper [CSI-Microbes: Identifying cell-type specific intracellular microbes from single-cell RNA-seq data](https://www.biorxiv.org/content/10.1101/2020.05.14.096230v1) by Welles Robinson, Fiorella Schischlik, E. Michael Gertz, Joo Sang Lee, Kaiyuan Zhu, S. Cenk Sahinalp, Rob Patro, Mark D.M. Leiserson, Alejandro A. Schäffer, and Eytan Ruppin. This repository contains the workflows to identify microbial reads from 10x and Smart-seq2 scRNA-seq datasets. These microbial reads can then be analyzed using the [CSI-Microbes-analysis repository](https://github.com/ruppinlab/CSI-Microbes-analysis). The code in this repository was written by Welles Robinson and alpha-tested by Alejandro Schaffer.
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## Requirements
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