diff --git a/build/pkgs/database_knotinfo/checksums.ini b/build/pkgs/database_knotinfo/checksums.ini index dfdb379d56a..89255902359 100644 --- a/build/pkgs/database_knotinfo/checksums.ini +++ b/build/pkgs/database_knotinfo/checksums.ini @@ -1,4 +1,4 @@ tarball=database_knotinfo-VERSION.tar.gz -sha1=d94335a4839946e73458064d6ad1def9595101c7 -sha256=9065ec00e22bd1e43716b3e0c2d1bb9e2c32e504a24f11d81ab556428bb4aa7f +sha1=5d9d19ead2d50e7ab6d48fddadb0a7635a9c7ca6 +sha256=5c005386d6f3ffdca3310a1721e377f570272f702a6c81f7d7215fe3935baaf7 upstream_url=https://files.pythonhosted.org/packages/source/d/database_knotinfo/database_knotinfo-VERSION.tar.gz diff --git a/build/pkgs/database_knotinfo/package-version.txt b/build/pkgs/database_knotinfo/package-version.txt index 142bb53d9d5..ac9016c8b7b 100644 --- a/build/pkgs/database_knotinfo/package-version.txt +++ b/build/pkgs/database_knotinfo/package-version.txt @@ -1 +1 @@ -2024.10.1 +2025.8.7 diff --git a/src/sage/databases/cubic_hecke_db.py b/src/sage/databases/cubic_hecke_db.py index 1bf6e6a729c..8a4b35111ca 100644 --- a/src/sage/databases/cubic_hecke_db.py +++ b/src/sage/databases/cubic_hecke_db.py @@ -455,7 +455,7 @@ def description(self): Return a description of the link corresponding to this basis element. In the case of knots it refers to the naming according to - `KnotInfo `__. + `KnotInfo `__. EXAMPLES:: diff --git a/src/sage/databases/knotinfo_db.py b/src/sage/databases/knotinfo_db.py index 6ab0baf81ba..546897e76b7 100644 --- a/src/sage/databases/knotinfo_db.py +++ b/src/sage/databases/knotinfo_db.py @@ -3,8 +3,8 @@ This module contains the class :class:`KnotInfoDataBase` and auxiliary classes for it, which serves as an interface to the lists of named knots and links provided -at the web-pages `KnotInfo `__ and -`LinkInfo `__. +at the web-pages `KnotInfo `__ and +`LinkInfo `__. To use the database, you need to install the optional :ref:`database_knotinfo ` package by the Sage command :: @@ -48,8 +48,8 @@ class KnotInfoColumnTypes(Enum): r""" Enum class to specify if a column from the table of knots and links provided - at the web-pages `KnotInfo `__ and - `LinkInfo `__. is used for knots only, + at the web-pages `KnotInfo `__ and + `LinkInfo `__. is used for knots only, links only or both. EXAMPLES:: @@ -68,8 +68,8 @@ class KnotInfoColumnTypes(Enum): class KnotInfoColumns(Enum): r""" Enum class to select a column from the table of knots and links provided - at the web-pages `KnotInfo `__ and - `LinkInfo `__. + at the web-pages `KnotInfo `__ and + `LinkInfo `__. EXAMPLES:: @@ -199,7 +199,7 @@ def url(self): sage: from sage.databases.knotinfo_db import KnotInfoDataBase sage: ki_db = KnotInfoDataBase() sage: ki_db.filename.knots.url() - 'https://knotinfo.math.indiana.edu/' + 'https://knotinfo.org/' """ if self == KnotInfoFilename.knots: return self.value[0] @@ -304,7 +304,7 @@ def description_url(self, column): sage: from sage.databases.knotinfo_db import KnotInfoDataBase sage: ki_db = KnotInfoDataBase() sage: ki_db.filename.knots.description_url(ki_db.columns().braid_notation) - 'https://knotinfo.math.indiana.edu/descriptions/braid_notation.html' + 'https://knotinfo.org/descriptions/braid_notation.html' """ return '%sdescriptions/%s.html' % (self.url(), column.name) @@ -317,17 +317,17 @@ def diagram_url(self, fname, single=False): sage: from sage.databases.knotinfo_db import KnotInfoDataBase sage: ki_db = KnotInfoDataBase() sage: ki_db.filename.knots.diagram_url('3_1-50.png') - 'https://knotinfo.math.indiana.edu/diagram_display.php?3_1-50.png' + 'https://knotinfo.org/diagram_display.php?3_1-50.png' sage: ki_db.filename.knots.diagram_url('3_1', single=True) - 'https://knotinfo.math.indiana.edu/diagrams/3_1' + 'https://knotinfo.org/diagrams/3_1' """ if single: return '%sdiagrams/%s' % (self.url(), fname) else: return '%sdiagram_display.php?%s' % (self.url(), fname) - knots = ['https://knotinfo.math.indiana.edu/', 'knotinfo_data_complete'] - links = ['https://linkinfo.sitehost.iu.edu/', 'linkinfo_data_complete'] + knots = ['https://knotinfo.org/', 'knotinfo_data_complete'] + links = ['https://link-info-repo.onrender.com/', 'linkinfo_data_complete'] #---------------------------------------------------------------------------------------------------------------------------- @@ -347,7 +347,7 @@ class KnotInfoDataBase(SageObject, UniqueRepresentation): sage: from sage.databases.knotinfo_db import KnotInfoDataBase sage: ki_db = KnotInfoDataBase() sage: ki_db.filename.knots - """ @@ -362,7 +362,7 @@ def __init__(self, install=False): sage: from sage.databases.knotinfo_db import KnotInfoDataBase sage: ki_db = KnotInfoDataBase() sage: ki_db.filename.links - """ # some constants diff --git a/src/sage/features/databases.py b/src/sage/features/databases.py index 2054f70376c..492462d3e26 100644 --- a/src/sage/features/databases.py +++ b/src/sage/features/databases.py @@ -180,8 +180,8 @@ class DatabaseKnotInfo(PythonModule): :ref:`package providing the KnotInfo and LinkInfo databases `. The homes of these databases are the - web-pages `KnotInfo `__ and - `LinkInfo `__. + web-pages `KnotInfo `__ and + `LinkInfo `__. EXAMPLES:: diff --git a/src/sage/knots/free_knotinfo_monoid.py b/src/sage/knots/free_knotinfo_monoid.py index 998c0dbf03b..0cb3e0ebb0d 100644 --- a/src/sage/knots/free_knotinfo_monoid.py +++ b/src/sage/knots/free_knotinfo_monoid.py @@ -4,7 +4,7 @@ :class:`~sage.knots.knotinfo.KnotInfoBase` class. A generator of this free abelian monoid is a prime knot according to -the list at `KnotInfo `__. A fully +the list at `KnotInfo `__. A fully amphicheiral prime knot is represented by exactly one generator with the corresponding name. For non-chiral prime knots, there are additionally one or three generators with the suffixes ``m``, ``r`` diff --git a/src/sage/knots/knotinfo.py b/src/sage/knots/knotinfo.py index d3961d9c4f8..0e1c5a412bd 100644 --- a/src/sage/knots/knotinfo.py +++ b/src/sage/knots/knotinfo.py @@ -4,8 +4,8 @@ This module contains the class :class:`KnotInfoBase` which is derived from :class:`Enum` and provides knots and links listed in the databases at the -web-pages `KnotInfo `__ -and `LinkInfo `__ as its items. +web-pages `KnotInfo `__ +and `LinkInfo `__ as its items. This interface contains a set of about twenty knots and links statically as demonstration cases. The complete database can be installed as an optional Sage @@ -209,8 +209,8 @@ REFERENCES: -- `KnotInfo `__ -- `LinkInfo `__ +- `KnotInfo `__ +- `LinkInfo `__ AUTHORS: @@ -469,7 +469,7 @@ def is_minimal(self, link) -> bool: class KnotInfoBase(Enum): r""" Enum class to select the knots and links listed in the databases at the web-pages - `KnotInfo `__ and `LinkInfo `__. + `KnotInfo `__ and `LinkInfo `__. EXAMPLES:: @@ -1323,7 +1323,7 @@ def cosmetic_crossing_conjecture_verified(self): Return whether the Cosmetic Crossing Conjecture has been verified for ``self``. - From the KnotInfo `description page `__: + From the KnotInfo `description page `__: A crossing change in a diagram of a knot ``K`` is called cosmetic if the resulting diagram also represents ``K``. The cosmetic crossing @@ -1359,7 +1359,7 @@ def homfly_polynomial(self, var1='v', var2='z', original=False): The HOMFLY-PT polynomial `P(L)` of a link `L` satisfies the following skein relation (see the corresponding `KnotInfo description page - `__): + `__): .. MATH:: @@ -1460,7 +1460,7 @@ def kauffman_polynomial(self, var1='a', var2='z', original=False): under regular isotopy `\Delta (L) = a^{w(L)} F(L)` where `w(L)` is the writhe of the link `L` satisfies the following skein relation (see the corresponding `KnotInfo description page - `__): + `__): .. MATH:: @@ -1547,7 +1547,7 @@ def jones_polynomial(self, variab=None, skein_normalization=False, puiseux=False The Jones polynomial `V(L)` of a link `L` satisfies the following skein relation (see the corresponding `KnotInfo description page - `__): + `__): .. MATH:: @@ -2005,7 +2005,7 @@ def khovanov_polynomial(self, var1='q', var2='t', torsion='T', ring=None, origin - :wikipedia:`Khovanov_homology` - :wikipedia:`Reduced_homology` - [ORS2013]_ - - `KnotInfo `__ + - `KnotInfo `__ """ if not ring: if self.is_knot(): diff --git a/src/sage/knots/link.py b/src/sage/knots/link.py index 78d8d8a7ce4..3366c1f02a0 100644 --- a/src/sage/knots/link.py +++ b/src/sage/knots/link.py @@ -28,8 +28,8 @@ .. SEEALSO:: There are also tables of link and knot invariants at web-pages - `KnotInfo `__ and - `LinkInfo `__. These can be + `KnotInfo `__ and + `LinkInfo `__. These can be used inside Sage after installing the optional package ``database_knotinfo`` (type ``sage -i database_knotinfo`` in a command shell, see :mod:`~sage.knots.knotinfo`). @@ -2071,7 +2071,7 @@ def khovanov_polynomial(self, var1='q', var2='t', torsion='T', ring=ZZ, base_rin be transferred to :meth:`khovanov_homology` Here we follow the conventions used in - `KnotInfo `__ + `KnotInfo `__ OUTPUT: @@ -3004,7 +3004,7 @@ def homfly_polynomial(self, var1=None, var2=None, normalization='lm'): in [KnotAtlas]_ Use the ``'vz'`` normalization to agree with the data - `KnotInfo `__. + `KnotInfo `__. EXAMPLES: