diff --git a/test/norm.rmdup.3.1.out b/test/norm.rmdup.3.1.out index e4f39c84..453fbee4 100644 --- a/test/norm.rmdup.3.1.out +++ b/test/norm.rmdup.3.1.out @@ -3,7 +3,7 @@ ##INFO= ##contig= #CHROM POS ID REF ALT QUAL FILTER INFO -1 1 . A . . SVLEN=-1000 -1 1 . A . . SVLEN=-2000 -1 1 . A . . SVLEN=-3000 +1 8 . T . . SVLEN=-10 +1 8 . T . . SVLEN=-11 +1 8 . T . . SVLEN=-12 1 18 . AC A . . . diff --git a/test/norm.rmdup.3.2.out b/test/norm.rmdup.3.2.out index 6a0be8e5..04a04d1f 100644 --- a/test/norm.rmdup.3.2.out +++ b/test/norm.rmdup.3.2.out @@ -3,5 +3,5 @@ ##INFO= ##contig= #CHROM POS ID REF ALT QUAL FILTER INFO -1 1 . A . . SVLEN=-1000 +1 8 . T . . SVLEN=-10 1 18 . AC A . . . diff --git a/test/norm.rmdup.3.vcf b/test/norm.rmdup.3.vcf index 3ae4455e..31517261 100644 --- a/test/norm.rmdup.3.vcf +++ b/test/norm.rmdup.3.vcf @@ -2,14 +2,14 @@ ##INFO= ##contig= #CHROM POS ID REF ALT QUAL FILTER INFO -1 10 . C . . SVLEN=-1000 -1 10 . C . . SVLEN=-1000 -1 10 . C . . SVLEN=-2000 -1 10 . C . . SVLEN=-1000 -1 10 . C . . SVLEN=-3000 -1 10 . C . . SVLEN=-2000 -1 10 . C . . SVLEN=-1000 -1 10 . C . . SVLEN=-3000 -1 10 . C . . SVLEN=-2000 +1 10 . C . . SVLEN=-10 +1 10 . C . . SVLEN=-10 +1 10 . C . . SVLEN=-11 +1 10 . C . . SVLEN=-10 +1 10 . C . . SVLEN=-12 +1 10 . C . . SVLEN=-11 +1 10 . C . . SVLEN=-10 +1 10 . C . . SVLEN=-12 +1 10 . C . . SVLEN=-11 1 20 . CCC CC . . . 1 20 . CC C . . .