Release Prep 3.3.0

[samuel-marsh]

• Update vignettes

  • ElbowPlot_scCustom
  • Downsample_Seurat
  • DimPlot_scCustom(..., split_downsample = TRUE)

• Complete Vignette Reorganization

• Progress bars

  • Move all progress bars to progressr framework (Using mcprogress for parallel progress bars instead to keep the mclapply framework.)
  • Add parallel progress bars
  • Rewrite necessary updates to parallel functions to support accurate progress reporting

• See Update/Check ggplot2 4.0.0 Compatibility (For release v3.3.0) #251

• Update Downsample_Seurat

  • Add support for Seurat's SketchData/LeverageScore sampling
  • Add support for geosketch python sampling
  • Add helpers functions

• Deprecate functions from previous releases

[cmulittlechild]

when will you release this version? some function not work with ggplot2 4.0.

[samuel-marsh]

@cmulittlechild,

Can you please open issue for any functions that are not working including error message and sessionInfo?

Thanks!
Sam